Phycodurus eques (leafy seadragon): 133413435
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Entry
133413435 CDS
T09682
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pee03009
]
133413435 (ddx55)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133413435 (ddx55)
Ribosome biogenesis [BR:
pee03009
]
Eukaryotic type
Pre-60S particles
Helicases
133413435 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
DTHCT
SBF_like
Cas3-like_C_2
AAA_22
YbjM
Motif
Other DBs
NCBI-GeneID:
133413435
NCBI-ProteinID:
XP_061553801
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All DBs
Position
15:complement(22742382..22748998)
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AA seq
656 aa
AA seq
DB search
MICGNKFPSSSSFHRRVNIDATRKRQLLVADLALASANHLRTCHFCSMENTTDGTWDSLA
GKLNDKILETLRELKFTHMTPVQAACIPLFMSNKDVAAEAVTGSGKTLAFVIPVLEVLLR
REEKLKKMQVGALVVTPTRELAMQISEVIGHFLQKFPQFTQMLMIGGNNPMEDVEKFKEN
GANIVVATPGRLEDMFRRKGDGVDLAGSVKSLDVLVLDEADRLLDMGFENSLNAILSFLP
KQRRTGLFSATQTQELDKLVRAGLRNPVRVAVKEKGVADGAARRTPSALSNYYTVSGAGG
GGPRGDAHAVFRRLLQVCRAERKFNALVAFLRQHKHQKQLVFFSTCACVEYFGRALETLV
KRVPVHCIHGKMKHKRNKIFADFRAVKSGILVCTDVMARGVDIPDVNWVLQYDPPSSASA
FVHRCGRTARIGNRGNALVFLLPMEESYVNFLSINQKCPLEKMPAVSDVVDVLPKVKALA
QADRAMFDKGMKAFVSYVQAYAKHECSLIFRVKDLDFASVARGFALLRLPKMPELRGKSF
PDFQPAPLDTENIRYKDKQREKLRQKTLAELKLRRREGVDDRAAKKPVRNQAWSKQKAKK
DRRKKNATKRKHAQSSDDEDENTEELLKDTRLLKKLKKGQICEEDFEREITGGADH
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtggaaacaaatttccctcgagctcaagtttccaccggcgtgtaaacatcgac
gcaacccggaagcgacaacttctcgtagctgacttagctttagcatcagctaaccatctt
cgtacgtgccacttttgcagcatggagaacacgaccgacgggacgtgggatagtttagct
ggaaaactaaacgacaagatcttagagacgctccgggaactcaaatttacgcacatgacg
cccgtgcaagctgcctgtatcccactttttatgagcaacaaggatgtcgctgctgaggcg
gtgactgggagtggaaagacattagcgtttgtcattcccgttctggaagttctgctcagg
agagaagagaagctcaagaagatgcaggtgggcgcgctggtggtcacgcccacgcgcgag
ctggccatgcagatcagcgaagtgatcggacacttcctccagaagtttccgcagttcacg
cagatgttgatgatcggcggcaacaacccgatggaggacgtggagaagttcaaggaaaac
ggggcgaacatcgtggtagccacgcccggccgcctggaggacatgttccgccggaagggc
gacggcgtggacctggccggctcggtcaagagtctggacgtgctggttctggacgaggcc
gacagacttctggacatgggcttcgagaacagcctgaacgccatcctgagcttcctgccc
aagcagcggcgcaccggcttgttctcggccacgcagacgcaggaactggacaagctggtc
cgagccggactgcggaacccggtccgcgtcgccgttaaggagaagggcgtcgcggacggc
gccgcccggaggacgccgtccgcgctaagcaactactacacggtgagtggcgctggcggc
ggcgggccgcgcggggacgctcacgcggtgttccgtcgtcttctacaggtctgccgcgct
gaacgcaagttcaacgcgctggtggcgtttctacggcaacacaaacatcagaagcagctc
gtcttcttcagcacgtgcgcctgcgtggagtacttcggccgcgctctggagacgctggtg
aagagggtccccgtccactgcatccacggcaagatgaaacacaaacgcaacaaaatcttc
gccgacttccgagccgtcaaaagcggcatcctggtgtgcacggacgtcatggcccgcggc
gtcgacatcccggacgtcaactgggtgctgcagtacgacccccccagcagcgccagcgcc
tttgtgcaccgctgcggtcgcacggcgcgcatcggtaaccgcggcaacgctttggtcttt
ctgctgcccatggaggagtcctacgtcaacttcctgtccatcaaccagaagtgtcctttg
gagaaaatgcccgccgtgagcgacgtggtggacgtgttgcccaaagtgaaggcgctggcg
caggcggaccgcgccatgtttgataagggcatgaaggctttcgtgtcatacgtgcaggcc
tacgccaagcacgagtgcagcctcatcttcagggtcaaagatttggattttgcgtcagtg
gcccgcggcttcgcgctccttcgcctgcccaaaatgccagaactgcgcgggaaaagtttc
cccgacttccagccggcgccgctggacacggagaacattcgctacaaggacaaacagcgc
gagaagctgcggcagaaaacgctggccgagctcaaactgcggcggcgggagggcgtcgac
gaccgcgcggccaagaaacccgtccggaaccaagcctggtccaaacagaaggccaagaag
gacagacgcaagaagaacgccaccaagaggaaacacgcacagtcctccgatgacgaagac
gaaaacacggaggagctcctgaaggacactcgtctgctcaagaaactgaagaaggggcaa
atctgcgaggaggacttcgagcgcgagatcaccggcggggcggatcattaa
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