Phycodurus eques (leafy seadragon): 133413449
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Entry
133413449 CDS
T09682
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pee03009
]
133413449 (ddx56)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133413449 (ddx56)
Ribosome biogenesis [BR:
pee03009
]
Eukaryotic type
Pre-60S particles
Helicases
133413449 (ddx56)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
AAA_22
Motif
Other DBs
NCBI-GeneID:
133413449
NCBI-ProteinID:
XP_061553851
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Position
15:complement(23224288..23230250)
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AA seq
554 aa
AA seq
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MATEKLQFHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AVPVIQRVLASKQSVREQDVRALILVPSRELGQQVQAMMRQLTAYCSRDVRVADIAGKAD
VSAQRPILMEKPDVVVGTPSRVLAHLNAHNLLLHTSLEMLVVDEADLLFSFGFEDDLKNL
LCHLPKIYQSFLMSATLSEDVQALKELLLHNPVTLKLQGSQLPDSSQLQQFSVQCEEEDK
FLVIYTLLKLRLVQGKTLIFVGALDRCYRLKLFLEQFSIPACVLNSELPVQSRCHIITQF
NQGFYDYIIATDEHRLADPAAASQAAGKGKKNKARKSKEKEYSASRGVDFQNVDNVINFD
FPVTVESYIHRVGRTARADNPGTALSFVAHTETAFLSEVEEALTGDKAESSLKPYQFKME
AIEGFRYRCRDAMRSVTKQAVREARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDQDLH
PAVIKPHLKNVPEYLIPYALRGVVNPLSNHRRRKRPTQKLKPHGVAKSSFKGTNPLRSFR
YAKKTANKKPSHSK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagaagcttcagttccacgaaatgggccttgacgaccgccttttaaaggcg
gtggctgatctgggttggtcccagcccaccttgatccaggagaaggccatccctctggct
ctggaaggaaaagacctgctggcacgggcccggaccggttctgggaagacggctgcttac
gccgtgcctgtcatccagcgcgtcctggcctccaagcagagcgttcgcgagcaggacgtg
cgggctctgatcctggtgccctccagggaactgggccagcaagtccaggctatgatgagg
cagctgacggcgtactgctccagggacgtccgcgtggccgatatcgccggcaaagccgac
gtgtctgcgcagaggcccatcctgatggagaagcccgacgtggtggtgggcacgccgtcc
cgcgtgctggcccacctcaacgcgcacaacctgctgctgcacacgtcgctggagatgctg
gtggtggacgaggccgacctgctcttctccttcggctttgaggacgacctgaagaatctg
ctgtgccacctgccaaagatctaccagtccttcctcatgtcagccaccctcagtgaggat
gttcaggccttaaaggaacttctgctgcacaatcccgtgactctgaagctgcaaggctcc
cagctgccagacagcagccagctgcagcagttcagcgtccagtgcgaggaggaggacaag
ttcctggtgatctacacgttgctcaagctgcggctggtgcagggcaagacgctcatcttc
gtgggagccctggaccgatgctaccgcctcaagctcttcctggagcagttcagcattccc
gcatgcgtgctcaactccgagctgcccgtccagtccaggtgtcacatcatcacgcagttc
aatcagggtttctacgactacatcatcgccacggacgagcacaggctggccgaccccgcc
gccgcatcgcaggctgcgggaaaaggcaagaagaacaaagcgcgaaagtctaaagagaag
gaatacagcgcctccagaggcgtggacttccaaaatgtcgacaacgtcattaactttgat
ttccccgtcaccgtggagtcgtacatccatcgagtgggaaggacagcaagagccgacaac
ccgggcacggccttgtccttcgtcgctcacacggaaaccgcttttctctctgaggttgag
gaggcgctgactggagataaagccgaatcttccctgaaaccctaccagtttaagatggag
gccattgagggcttcaggtacagatgcagggatgcgatgcgatcggtcaccaagcaggcg
gtgagagaagccagattgaaggagatcaagcaggaactgcttaactcggagaagctgaag
acatattttgaagacaacccgagagacctgcagctgctcaggcacgaccaagaccttcac
cctgccgtcatcaaacctcacctgaagaacgtccctgaatacctcattccttatgctctg
agaggtgtcgtcaaccctctgtccaatcacaggaggaggaagaggccaacccaaaagctc
aaaccacacggagtcgccaaaagcagcttcaagggaacgaaccctctgaggagtttccgc
tacgcaaaaaagacggcgaacaaaaagccgagccattcaaaatga
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