Phycodurus eques (leafy seadragon): 133413452
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Entry
133413452 CDS
T09682
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133413452 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133413452 (prpf4)
Spliceosome [BR:
pee03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133413452 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_EML
Beta-prop_Aladin
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR41
Ge1_WD40
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR11_1st
WD40_RFWD3
WD40_like
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
133413452
NCBI-ProteinID:
XP_061553861
LinkDB
All DBs
Position
15:complement(23396879..23404094)
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AA seq
510 aa
AA seq
DB search
MSDDEDSAPAPKKGRVFYGSLEEKERERLNAELASGSVTGSDGVKAGIEAGHINISSYET
LELEEHVNVRQQEALAEFERRRRARQITVSTDDTEVKAGLRALGEPITLFGEGPADRRER
LRGVLSVVGPDALKKSRRDEDRAKRSQEECQQTWYHEGPASLKNARLWLARYSLPRSMKR
LEVARAQKEMCEAARTIRQQELNKSLRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWS
GLCKLWSVPDCNLIRTLRGHNTNVGAVVFRPQAGVSLDQSDVSLASCAADGSVKLWNLLS
DEPVLSIEDHSERVSRACWHPSGRFLGTTCYDHSWRLWDMEVQEEILHQEGHSKGVHDLH
FHPDGSLAATGGLDAFGRVWDLRTGRCVVFLEGHLKEIYSVHFSPNGYHLATGSGDNTCK
VWELRNRKCLYTIPAHQNLLSGVRFQPTDGHFLLTCAYDNMAKVWSHPGWMPLKTLAGHE
GKVMGVDVSPDGKLIATCSYDRTFKLWVSE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacgaggactctgctccggccccgaagaaaggtcgcgtgttctacggaagc
ctggaggaaaaagagcgcgagcgcctgaacgcagagctcgccagcggctcggtgacagga
agcgatggcgtcaaggccggaatcgaggcgggacacatcaacatttcgtcttacgaaacg
ctggaactggaggagcacgtgaacgtcaggcaacaggaagcactcgccgagtttgagagg
aggcggcgagcgcgacagatcaccgtctctaccgacgacaccgaagtcaaggcggggctg
cgagccctcggggagccaatcaccttgttcggggaggggccggcggatcggcgggagagg
ctgcgtggcgttttgtctgtggtgggtccagatgccctgaaaaagtccaggagagatgaa
gacagagccaagcgatcacaggaagagtgccagcagacgtggtaccacgaaggccccgcc
tcgctcaagaacgcacgtctctggttggcccgttactccctgcccaggtcgatgaagcgc
ctggaggtggcccgggcccaaaaggaaatgtgcgaggcggccagaaccatccgccaacag
gagctcaacaagagcctcagaaacttgaacaacttctgcagtcagatcggcgacgatcga
ccaatcagcttttgccacttcagtcccgactccaaaatgctggccaccgcctcctggagc
ggattgtgtaagctatggtccgttcccgactgcaacctgattcgcacactgagaggccac
aacaccaacgtgggcgcggtggtcttccgcccgcaggccggcgtgtctctcgaccaatcg
gacgtcagtttggcctcgtgcgccgcggacggctccgtcaagctgtggaacctgctcagc
gacgagccggtgttgagcatcgaggaccacagcgagcgagtttcgcgagcgtgctggcat
ccgtccggaaggttcctgggaaccacgtgctacgatcattcgtggcgcctttgggacatg
gaggtgcaggaggagattctccatcaagaaggtcacagcaaaggagttcatgatctccac
ttccatcctgatggatcactggctgctaccggcggactggatgcctttggaagagtttgg
gatcttcgcacaggacgctgcgtggtcttcctggaaggtcacctgaaggagatctacagc
gtacacttctcacctaacggctaccacctggcgacgggaagcggagacaacacctgcaag
gtgtgggagctgaggaacaggaagtgtctttacacaatccccgcccaccaaaacctgttg
tcgggtgtcagattccagcccacggacggccacttcctgttgacgtgcgcgtacgacaac
atggcgaaggtctggagtcaccccggctggatgccgctgaagacgctcgccggccacgag
gggaaggtgatgggcgtggacgtgtcccccgacggcaaactcatcgccacgtgctcatac
gacagaacctttaaactttgggtgtcggaatga
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