Phycodurus eques (leafy seadragon): 133413565
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Entry
133413565 CDS
T09682
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133413565
03041 Spliceosome [BR:
pee03041
]
133413565
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133413565
Spliceosome [BR:
pee03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133413565
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133413565
NCBI-ProteinID:
XP_061554076
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Position
15:complement(20468290..20483211)
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AA seq
385 aa
AA seq
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MDDEQPKTLYVGNLSRDVTEALVLELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAM
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPTPKTT
NETSTTKQLSFDEVVNQSSPSNCTVYCGGVTAGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSVEGFVVKCYWGKETTDMVSPIQQVQMPQSTVSFAAQPY
SQWGQWYGNTQQIGQYVPNGWQVPSYGVYGQSWDQQCYNPLPSGAGWTGVGAVSNGGMVE
PGQGVNGTMLANQAGMAGTAGFHTH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgagcagcccaaaaccctgtatgtggggaacctgtcgcgagatgtgacagaa
gcccttgtactggagctgtttggccagatcggaccttgcaagagctgtaaaatgatcgta
gatacggcgggtcacgatccctactgctttgtggaattctatgagcatagacacgccatg
gccaccattgcggccatgaacggtcggaaaattcttggtaaggaagtcaaggtcaactgg
gccaccacaccgaccagccaaaagaaggacacaagcagtcacttccacgtctttgtcgga
gatctaagtcctgagatcaccacagatgacatcaaggcggctttcggtccctttgggaaa
atatctgattgccgggtggtgaaggacatggccaccgggaagtccaaaggctacggcttc
gtgtccttcttcaacaaatgggacgcggagaacgccatccagcagatgggaggccagtgg
ttgggagggcggcagatcaggaccaactgggccacacggaagcccacgcccaaaaccacc
aatgaaacgagcaccacgaagcagctatccttcgatgaggtggtgaaccagtccagtccc
agtaactgcaccgtctactgcggaggagtcacggcaggcctcacagagcaaatcatgaga
cagaccttttcgccttttggacaaatcatggaaatccgcgttttcccggataagggctac
tcatttgtgaggttcaactctcacgaggcggccgcccacgccatcgtctccgtcaacggc
acgtcagtggagggtttcgtggtcaagtgttactggggcaaggagaccacagacatggtc
agccccatacagcaggtccagatgcctcagagcacggtgagcttcgcggcgcagccctac
agccagtgggggcagtggtacggcaacacgcagcagatcggccagtatgtgcccaatggc
tggcaggtgcccagctacggcgtctacgggcagagctgggatcagcagtgctataatcct
cttccctctggcgccgggtggaccggcgtgggcgccgtgagcaacggcggtatggtggag
cctggccagggcgtcaacggcaccatgctcgccaaccaggctggcatggctggtacggct
ggcttccacacccactga
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