Phycodurus eques (leafy seadragon): 133413568
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Entry
133413568 CDS
T09682
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pee03000
]
133413568 (rc3h2)
04121 Ubiquitin system [BR:
pee04121
]
133413568 (rc3h2)
Transcription factors [BR:
pee03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
133413568 (rc3h2)
Ubiquitin system [BR:
pee04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133413568 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-C3HC4_4
zf-CCCH_UNK
Prok-RING_4
zf-C3HC4_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133413568
NCBI-ProteinID:
XP_061554084
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All DBs
Position
15:11592762..11631352
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AA seq
1141 aa
AA seq
DB search
MPVQAAQWTDFLSCPICYNEFNSSGHQPVSLGCSHTVCRTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPDVQPVSLSSATDVGHYEACRVCVEELALYLKPISCTKGVAP
PSPGALSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEGRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSIQELTIVLQRTGDPANLTSLRAHLELLANI
DHNTDDASPPWEELENVMLAIKLVVHGLVEFIQSFSKKNHDSPQPQVNSKYKTSMCRDLR
HQGGCPRGSNCTFAHTQDELEKFRLRNKKSGSVSRAFPSPGGKTFTVEDSIQTDGSAGVG
EDTLTEGSPHPQLISRGADTMEGIKRVVSSESICASGNNGLSDTSMTLLDSAEQEPVSPP
RTHASHSSTLSPLIAMGRVTDGGGGPVSKHGGPLMLRVPHPSQPSDQFYQEQQSAYDTAH
HQPNSGSYYPSTLHPSHKPCMARFLRSSNVPESFLPPSSFPSDPQISHHPPSSCSTGYPP
HPTRDRMGPPIFHNNPGQPQYGPLASAHGVYAPLYDSRRVWRPQLYNREDARSNSLPPEV
LHSSVYQPPLRERFNSLDSNYYSASEHRTALHREYGHVPLVYDDLFRRKQEQWVHHHHHH
HHHSTRRPSQPSAIFNIDFGPEHVESSAGACVGCCFRGEESLARYTPWSCAATIGPCHSP
FEPEVLTQAASHSALEQSFLTKQLDGCSSGGSGVSSNGGVNSGGVTKRWLHSLDHCRRLK
EEDPIIPFSEGPIISKWGAISRASRSGYHTTDPVQATACQGGASTTPINFKDYNCHLDRD
EYRWSSRGSNSSSHSSFLESEQLCQHSSSEKIACDLQIHQTAFSQDRDLEESEPGTERDI
ELELCALDIEDSNIKSQVSLDVATPYSEDASHLLPLSCSSSLLSSPLEEQYHAEDPSTDK
MDTYLLKKMAFRKSLSPVGLVSGGLAVGKLVLRTGTPRPGGDSSPRSCPETPGAEMLLSG
S
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggccgcccaatggacggacttcctgtcctgtcccatctgctacaacgag
ttcaacagcagcggccaccagcccgtcagcttgggctgctcgcacacggtgtgccgcacc
tgcctgcacaagctgcaccgcaaagcctgccccttcgaccagacgcccatcagcaccgat
attgacctgctgcccgtcaactgtgccctgctgcagctggtcggagctcaggttccagac
gtgcagccagtcagcctgagcagtgcgacagatgttggacactatgaggcctgcagggtg
tgtgtggaagagctggctctatacctgaaaccaattagctgcactaaaggtgtggcgcca
ccgagtccgggcgcgctcagccgacccatgcagaggaagctggtgacgctggtcaactgc
cagctggtggaagaagaaggcagagtgcgggctgtgcgggcgggccggtcgctgggcgag
cggacggtcaccgagctcatcttgcagcaccagaacccccaacagctgtccgccaacctc
tgggctgcagtgagggcgcggggatgccaattcctggggcctgccatgcaggaggatgcc
ctaaagctggtgctattggctctggaggacggatctgctctgtccaggaaggtgctggtg
ttgtttgttgtccagaagttggaagggcgcttccctcaggcctccaaaaccagcataggg
catgtggtgcagctcctctatagggcctcctgcttcaaggtgaccaagcgggatgaagat
tcttcgctgatgcagctgaaggaggagttccgcacgtacgaggctctcaggagagaacac
gacgcccagattgtgcacatcgccatggaagccggcctccgcatctcccccgagcagtgg
tcctctctactgtacggggacctggtccacaagtcgcacatgcagtccatcattgacaag
ttgcagtctccagagtcatttgcaaagagcatccaggagctgaccatcgtcctgcagagg
acaggagaccctgccaacctcacgagcctcagagctcacctcgaactgctggccaacata
gaccacaataccgatgatgcatcaccaccatgggaggagctggaaaatgtcatgttggcc
ataaagttggtggttcatggccttgtagaattcatccaaagcttcagcaagaagaaccac
gactctccacagcctcaggtgaacagcaagtataagaccagcatgtgcagagatctgcgt
catcaaggaggatgtccaagaggaagcaactgcacatttgcgcacacacaggacgaactt
gagaaatttcgtctgaggaacaagaagagcggcagtgttagccgtgcattcccttcaccc
gggggaaaaaccttcacggtggaggacagtatccagactgatgggtctgcaggagttgga
gaggacaccctgacagagggcagccctcacccacaactcatttccagaggagctgacacc
atggagggcataaagagggttgtgtccagtgaatctatttgcgcaagtgggaacaacggg
ctgagtgacaccagtatgaccttactggactcagctgagcaggagcccgtgtctccgccc
agaactcacgccagccactcctcaacgttgtctcctttgatcgccatgggacgggtgact
gatggtggcggggggcccgtgtctaaacatggtggtcccctcatgctgcgagtgcctcat
ccttctcagccctcagaccagttctaccaggagcaacaatctgcgtacgacacggcccac
caccagccaaactcaggttcctactacccatctactctccatccttcacacaaaccctgc
atggctcgcttcctcagatcttccaacgtcccagaatcctttctgccgccgtcctccttt
cccagtgaccctcaaatatcccatcatcccccctcctcttgttccacgggatatccacct
catccaacgagggaccgcatgggacctcccatcttccacaacaacccagggcagcctcag
tatggacctctggcctctgcccatggggtttatgcacctctctatgacagcagaagagtg
tggaggcctcagctgtacaatagagaggatgcgaggagtaattcattgcctccagaggtg
ctgcattcctctgtctaccagcctccactcagggagagattcaactcgctagacagcaac
tactactctgcctcagagcaccgtacagcactgcacagggagtacggccacgttcctctg
gtctacgatgacctgttccgacgtaagcaagaacagtgggtgcatcaccaccaccatcat
catcatcacagcaccagaaggccctcccagccctctgccatcttcaacattgatttcgga
cctgagcatgtggagagcagtgcaggtgcgtgtgttgggtgctgcttcagaggtgaggaa
agcttggcgcgctacacgccgtggtcctgcgccgccaccatcgggccctgtcacagccct
tttgagcctgaggtgctcacgcaagctgcgtctcactctgccttggagcagtcgtttctt
actaagcagttggacggctgcagcagtggcggcagtggtgttagcagcaacggcggtgtt
aacagcggtggcgtcacaaagcgttggctgcactcgttagatcactgcaggcgcctgaaa
gaagaggaccccatcattcctttcagcgagggacccatcatctccaagtggggggccata
tccagggcgtcccgctcgggctatcacaccaccgatcctgtccaagcaaccgcttgccag
ggtggcgctagtaccacgcccattaactttaaagattacaattgccacttggatcgtgat
gagtacaggtggagctccaggggatccaactcttccagccactccagtttcctagagagt
gagcagctttgtcaacattcgtcaagcgagaaaattgcatgtgatctgcaaatccaccag
acagccttcagccaggatcgggaccttgaggagagtgagccaggcacggaacgggacatt
gagcttgaactgtgcgctctggacatagaggactcgaacatcaagtctcaggtttctttg
gacgtggccacgccatattccgaggatgcctcccacctcctcccactctcctgctcctct
tcactcctgtcatccccgctggaggaacaataccatgctgaggacccttcaacggataag
atggacacttacctgctgaaaaagatggcctttagaaagtcgctgtctcctgtaggcttg
gtgtcaggtggtctggccgtcggcaagctggtgctgcgcaccggaacgcctcgaccgggc
ggcgactcctctccacgctcttgtcccgaaactcccggggcggagatgctgctcagtgga
agctaa
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