Phycodurus eques (leafy seadragon): 133413852
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Entry
133413852 CDS
T09682
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133413852 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133413852 (prpf38a)
Spliceosome [BR:
pee03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133413852 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
133413852 (prpf38a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
CcmD
Motif
Other DBs
NCBI-GeneID:
133413852
NCBI-ProteinID:
XP_061554695
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Position
15:23932840..23935694
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AA seq
308 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYECKYWKEECFGLTAELVVDKAMELKYVGGV
FGGNIKPTPFLCLALKLLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIHELLHSERMCDIILPRLQKRQVLEEAEMLETR
VSALEEDLDEAESSEDDEDEDERAERIPSPEPHRRAYRDDRPRRSPSPRRRRSRSPRRRS
RSPKARRSPADSRREKRRSKSPRRPHRERRRRSKSPVAHHRGHRHRSHSKSPDKSSKKSH
KKSRRGNQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaggacggtgaaagacgccaacagcatccacgggacgaacccgcagtacctg
gtggagaagataatccgcactcgcatttacgagtgcaagtactggaaggaggaatgtttc
gggctgacggccgagctggtggtggacaaggccatggagctcaagtacgtgggtggcgtg
ttcgggggcaacatcaagcccacgccgttcttgtgcctcgccctcaagctgttgcagatc
caacctgagaaggacatcatcgtggagttcatcaagaacgaggacttcaagtacgtgcgc
ctgctcggcgccatgtacatgcgcctgacgggcacggccgtggactgctacaaatacctt
gagccgctctacaacgactacaggaagatcaagagccagaatcgcaacggcgagtttgaa
ctcatgcacgtggacgagttcatccacgagctgctccactctgagaggatgtgcgacatc
atcctgccgcgcctgcagaagaggcaagtcctggaggaggccgagatgctggagacccgc
gtcagcgctctggaggaggacttggacgaggcggagagcagcgaggacgacgaggacgag
gacgagcgggcagagaggattccgagccccgagcctcaccgccgggcctaccgcgacgac
agaccccgccgctcgccgtcgccccgccgccgacggagccgctcgcccaggcggaggagc
cgctcccccaaggccagacgcagccccgccgacagccgcagggagaagcgccgtagcaaa
agcccgcgccgcccgcaccgagagcggagacgtcgctccaagtcgccggtggcccaccac
agaggccaccggcaccgcagccactccaagagccccgacaagagctccaagaagagccac
aagaagagtcgcagggggaaccagtga
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