Phycodurus eques (leafy seadragon): 133413982
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Entry
133413982 CDS
T09682
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133413982
04518 Integrin signaling
133413982
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133413982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pee00536
]
133413982
Glycosaminoglycan binding proteins [BR:
pee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133413982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Pur_ac_phosph_N
Fn3_VIN3
FN3_Tor_3rd
DUF4998
DUF7949
hEGF
EGF
Motif
Other DBs
NCBI-GeneID:
133413982
NCBI-ProteinID:
XP_061554935
LinkDB
All DBs
Position
15:complement(20373297..20420863)
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AA seq
1665 aa
AA seq
DB search
MATGVFMRCLLVSALLGFSAAGLVKRMLRHRRQIPLEHNVTSPGVDHQPVVFNHVYNINV
PAGHLCSVDLDAAESIAPSETAMTSGRHLSAEGESQIIFTHRINIPRRACGCAADLPRIL
DLMSRIEMLEGEVSALRSRCGGGEGVCCTAQAIGNVRTRPLCGGHGNYSTETCRCTCEPG
WKGANCSELDCPEGFTGDDCSRSICPENCRDHGHCVGGKCVCKEPWIGLDCSELICPKDC
FGRGLCVNGTCHCEPGFSGEDCKQLTCPADCHGNGLCIDGRCACTAGYGDDDCSRLTCLN
DCNDRGTCFNGMCICDDGYQGDDCSQLACPNDCNGRGQCVNGKCACDVGFQGEDCSEISC
PKDCLQKGRCINGQCVCQEGFAGEDCSVKTCPSNCYGRGECIEGRCECHAGFTGNDCALL
SCPNNCENRGRCLDGQCVCDEGFAGEDCGRKACPNDCLARGHCNDGVCVCQEGYSGHDCS
RLTCPDKCNSRGHCVKGRCECESGYEGESCAERSCLNGCHDRGHCVDGQCVCDEGYIRDD
CSEVSPPKDLTVGEVSTETVDLSWINDMLVTEYLITYVPTQPGGLLLNITEPGDQNTATV
KELEPGLEYDINVYAVLSNKRSVPVSARVATALPQPEGLRFKSVRENAVEVVWEQLNVPF
DGWEIYFRNMKEDNGKVVSTVPSSQNRFVQSGLGPGQEYEVSISVIKNNNKGPPAIQQVT
TSIDPPRQLQVLDVSDSSALINWSDPVAETDRVTLFYKPSQASSEGAKVEIFPLDKQHSL
EGLKPDTEYTVSLVARSRDVSSEPAAITFTTALDAPRELLAILQTEDSITLRWRNSQADV
DSYRVKYSPLSGAAHGEEVLPRGPGETTMATITGLKAGTEYGIGVTGVKNERESLPATIN
AATDLDPPRDLEQTVSTETSISIRWEKPHAKVSRYRLVYVSRDGQVEETVIPASETTFVL
PDLTPATSYTVTLTAERGHRMSSPVTLAASTEAARPSVANLTFSDVTWEGFTASWSPLGG
DFDSFVVEVTNLDNTAQSQNLSVSGGALSLGLWGLNANTSYMVGLYPLYRGAFLEPVYAE
ATTEAEPEVEHLFVSDITADGFRVSWTADEDLFDRFVIKLRDSKRLSRPQEHSVHGGERT
RLITGLMAGTEYEIELYGLSLDHRSQPIFGVAQTGLTTPKGLRFSDVTDLSAVVHWSMPQ
SAVDNYHITYMPFEGGSQMSVTVDGNVLQALLPNMSPGRMYQVTVSAVKGLEESDPSGDV
VTTALDRPQDLTTVNVTDGSALLRWKPSVATVDEYMITYSSESVSPTVERVAETELEIGS
LLPGTLYTVELVATREAQMSASVLTEFTTKVDSPRDLVAINIETDSATLTWRPPQAAVSG
YSLTFSAADGMTREVMLSPTATSYNMAQLAGSTEYTVRLQAVAGAERSRHVTAVFSTVGQ
LHKYPKDCAQIFLNGERATGVYTVYVGGVESQVIQVSCDMDTDGGGWMVFLRRQNGKLEF
FRNWKNYTAGFGNVNDEFWLGLSNLHKITSAGQYVLRVDLRDSGESAYAQYDKFSIAEPR
TRYKIYIGAYSGTAGDSMTYHQGRPFSTFDNDNDIAVTNCALSYKGAFWYKNCHRVNLMG
KYGDKSHSKGINWFHWKGHETSIEFAEMKLRPTDFGNPESRKKRS
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggccacaggagttttcatgcgctgcctcctcgtcagcgccttactcggcttctcggcc
gccggcctcgtgaaaaggatgctccggcatcgtcgccagatccctctggagcacaacgtc
acctcgcccggcgtggaccaccagcctgtggtctttaaccatgtctacaacatcaacgtc
ccagctggccacctatgctccgttgacctggacgccgcagagagcatagcaccctcagaa
accgccatgacctccggccgccacctttctgcggaaggggagagccagatcatcttcacc
caccgcatcaacatccctcgcagggcgtgtggctgcgccgccgacctgccgcgtatccta
gacctgatgagccgtatcgagatgctggagggtgaagtgtcagcgttgaggagtcggtgc
gggggtggtgagggagtgtgttgcaccgcacaggcaatagggaacgtgagaaccaggcct
ttgtgcggcggacatggaaactatagcacggagacgtgcaggtgcacatgcgagcccggc
tggaagggagccaactgctctgagcttgattgtcccgagggtttcaccggggatgactgc
tctcggagcatctgccctgaaaactgccgagatcacgggcattgtgttggcggcaagtgt
gtttgcaaggagccctggatcggtttggactgctccgaactgatttgccccaaagactgc
tttggtcgtgggctctgcgtaaatggaacctgccactgtgagcccggtttctccggggag
gactgcaaacagctcacctgtcccgccgactgccacggtaacggcctctgtatcgacggc
cgctgcgcgtgcacggcgggttacggcgacgacgactgctcccgtctcacctgcctcaac
gactgcaacgacagaggtacctgcttcaacgggatgtgcatctgcgacgacgggtatcaa
ggcgacgactgcagccagttagcgtgtccgaacgactgcaacggccgaggccagtgcgtc
aacgggaagtgcgcttgcgacgtcggcttccaaggagaagactgcagcgagatttcctgc
ccgaaagattgcctccagaagggacgctgcatcaatgggcaatgcgtgtgccaagagggc
tttgctggcgaggattgcagtgtcaagacgtgcccctcaaactgctacggtcgtggcgag
tgcatcgagggccgctgcgagtgccacgccggctttaccgggaatgactgcgccctgctg
agctgccctaacaattgcgagaaccgcgggcgctgcctcgacgggcagtgcgtgtgcgac
gaaggttttgccggtgaggactgcggtcggaaggcgtgcccaaatgactgcctggctcgc
ggccactgcaacgatggcgtgtgcgtctgtcaggagggctactcgggccacgactgctct
cggctcacctgtccggataagtgcaacagcagggggcactgcgtcaagggaaggtgcgag
tgtgagagcgggtatgaaggggagagttgcgcagaacggagctgcctcaatggatgccac
gacagaggacattgcgttgacggtcaatgcgtctgcgatgaaggttacatcagagacgac
tgctctgaagtgtctcctccaaaggatctcactgtgggtgaggtcagcacagagacggtg
gacttatcctggatcaacgacatgctggtgaccgaatacctcatcacatacgtgcccacc
cagcccggcgggctgcttttgaacattaccgagcccggagaccaaaataccgccacggtc
aaagagctggagccgggtttagagtacgacatcaatgtgtatgcagttctgagcaacaag
aggagcgtgcctgttagcgccagggtggccacagctcttccacagccagaaggtttgaga
ttcaagtctgtgagggagaacgccgtcgaggttgtgtgggaacagctgaacgttcctttc
gatggctgggagatctacttccgtaacatgaaagaagacaatggaaaggtggtgagcaca
gttccctcatctcaaaaccgcttcgtccagtcaggcctcggtccaggtcaggagtatgag
gtgtccatcagcgtgataaagaacaacaacaagggaccaccagcgatccaacaagtcaca
accagcattgaccccccacggcagctccaggtgctggatgtgagcgactcctcagcgctg
atcaactggtctgatcccgtggcagagacggaccgggtgactctattttacaagcccagc
caagcctcttccgagggcgccaaagtggagatcttcccactggacaagcagcacagcctg
gagggcctgaagcccgacactgagtacacggtgtcgcttgtggctcgcagccgagacgtc
agcagcgaaccagcggccatcacctttaccacagcactggatgctcccagggagctgctg
gccatcctgcaaacagaagacagcatcacgctgaggtggcgcaacagtcaggccgatgtg
gacagctatcgtgtgaaatacagcccgttatctggcgcggcccacggcgaggaagtgtta
ccacgaggaccaggagaaaccaccatggccacaattacagggctgaaggcagggaccgag
tacgggattggcgtgaccggcgtgaagaacgagcgggaaagcctgccagctaccataaac
gcagcgaccgacctggaccctccccgagatctggagcaaacagtgtccactgagacatcc
atcagcattcggtgggagaagccacacgccaaggtgtcgcgataccggttggtgtatgtt
tccagagacggacaagtcgaggagacggtgatccctgcctccgagactacgttcgtttta
cctgacctgactccggcgacaagttacacagtaacgttgacagcagagcgaggccacagg
atgagctcgccggtcactctggctgcatccacagaggcggcgaggccctccgtggccaac
ctcaccttctctgacgtaacgtgggaaggcttcacggcctcttggagccccttgggcggc
gactttgacagctttgtggtggaggtaacaaacttggacaatacggcacagagccagaac
ctgagtgtgtcgggcggcgcactcagcctgggactctggggcctgaacgccaacaccagc
tacatggtgggcctgtaccctctctaccggggcgccttcttggagcccgtgtacgccgaa
gccaccacagaggcggaaccggaggtggagcatctctttgtctctgatatcacggccgac
ggtttccgtgtgtcgtggacggcggacgaagacctctttgacagatttgtgatcaaacta
cgggacagcaaaagattatcccgtcctcaggagcacagtgttcacggcggcgagcgaacc
aggctaatcactggactcatggcaggcacagagtatgaaattgaactttacggcctttcg
ttggaccaccgctcccaaccgatctttggggttgctcagacaggcctgacaactccgaag
ggccttcgtttctctgacgtgacagacttgtcagccgtggtccactggtccatgcctcag
tctgcagtcgacaactatcacatcacctacatgccatttgagggaggaagccagatgagc
gtaactgtggacggcaacgtgctgcaagctttgctgcccaacatgagtcctggcaggatg
taccaggtgactgttagtgccgtgaagggtcttgaggagagtgaccccagcggtgatgtc
gtaaccactgctttggacagacctcaggatctgaccacggttaacgtcacggacggctcc
gctctgctgcgatggaaaccatccgtggccacggtggacgaatacatgataacttatagt
tctgagtcagtttccccgaccgtggagcgtgttgccgaaaccgagttggagattggctcg
ttgcttccaggaacgctctacaccgtggagctcgtcgccaccagagaggcgcagatgagc
gcctctgtcttgacagaatttaccaccaaggtggactcccctcgagacctggtggccatc
aacattgaaacggacagcgccaccctgacatggagacccccacaggccgccgtcagcggt
tactccctgaccttctctgcggcggatgggatgacccgggaggtcatgctgagtccgacc
gccacctcgtacaacatggcccagctggccggctccacagagtacacagtccgactgcaa
gccgtcgccggagctgagagaagtcgccacgtaaccgccgtctttagtacagttggccag
ttgcacaagtacccaaaagactgtgcacagatcttcctgaatggcgagcgcgcgacaggc
gtgtacaccgtctacgtgggcggcgtggagagccaagtcatccaggtctcctgtgacatg
gacacagacggcggaggatggatggtcttcttgagacggcaaaacgggaagttagagttc
ttcaggaattggaagaactacactgctggtttcggtaacgtgaacgacgagttctggctg
ggtcttagcaacctccacaagatcacatctgctggccagtatgtgctgcgcgtggacctg
agggacagcggagaatccgcctacgctcagtacgacaagttctccattgcagagcccaga
acgcgctataagatttacattggggcttatagcgggacggcaggcgactccatgacgtac
caccagggccgtcccttctccaccttcgacaacgacaacgacatcgccgtcaccaactgc
gctctgtcctacaagggagccttctggtacaaaaactgccatcgtgtcaacttgatggga
aaatacggagacaagagtcacagtaagggcatcaactggttccactggaagggccacgag
acctccatcgagtttgcagagatgaaactccgaccgaccgacttcgggaatccagagagc
aggaagaaaagatcgtag
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