Phycodurus eques (leafy seadragon): 133414635
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Entry
133414635 CDS
T09682
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03013
Nucleocytoplasmic transport
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133414635 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
133414635 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133414635 (thoc6)
03041 Spliceosome [BR:
pee03041
]
133414635 (thoc6)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133414635 (thoc6)
Spliceosome [BR:
pee03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133414635 (thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EML
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_ACSF4
Beta-prop_EIPR1
TRM82_WD
Beta-prop_CAF1B_HIR1
DSE1_N
WDR54
Beta-prop_RIG_2nd
Beta-prop_VPS8
WD40_like
CFAP251_N
ASA1
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR75_1st
TRAPPC10_1st
Motif
Other DBs
NCBI-GeneID:
133414635
NCBI-ProteinID:
XP_061556121
LinkDB
All DBs
Position
16:complement(23394919..23403668)
Genome browser
AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIGIFSLCAALSPDVSEAGRKPVLTFPAHD
GPVFCLESFGGHLLSAGDGSVSAWNWAELIKKNVKALWTKRPQYKASMEIPEINAMAVNP
RDNSVVFGGGDNNVHVLDLENGVFKSVLRGHSDYVHCLSVREREGEILSGGEDGAVRMWD
SRTSQCVHCVDVHKYQKCARPQFGKWISCLTTDSDWMLCGGGPSLSLWHLRSLTPTSVFE
LNGCQKRASFFQDMILAVGQGPAVSHCLLGGQVKAQIPCTPNNINSLELNTNSAEHQVLT
VAGSSQYVDVFTNVSYRAFSLRF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggccccgtcgagctgttgcacatgtcggtgttctcgcaaagtttttcgccgtgcgga
cgcttcctggcggcggggaacaactacggagagatcggcatcttcagtttgtgcgcagct
ctgagtccggacgtgtcggaggcgggtcggaagcccgtgctgacctttccagctcacgac
ggtccggtcttctgtctggagtccttcggcggccatcttctgagcgccggcgacgggtcg
gtcagcgcctggaattgggccgaactcatcaagaagaacgtcaaagcgctgtggaccaag
agaccccaatacaaggccagcatggagatccccgagatcaacgccatggccgtcaaccct
cgagacaacagtgtggtgtttggcggcggtgacaacaacgttcacgtcttggacctggag
aacggcgtcttcaagtccgtcttgcggggacactcggactacgttcactgcctgagcgtg
agggagcgcgagggcgagattctgtcgggcggcgaggacggcgctgtccggatgtgggac
agcaggacgtctcagtgcgttcactgcgtggacgtgcacaagtaccaaaaatgtgcccgc
cctcagtttggcaagtggatcagctgtttaacgaccgactcggattggatgctgtgcggc
ggggggccatcgctttccctgtggcaccttcgttctctgacgccgacgtccgtcttcgag
ctgaacggctgccagaaacgagccagcttcttccaggacatgattctggcggtgggccaa
ggccccgccgtgtcccactgcctgctgggggggcaggtcaaggctcagatcccgtgcacg
cccaacaacatcaacagcctggagctcaacaccaacagtgcggaacaccaggtgttgacg
gtggcaggaagcagccagtacgtggacgtgttcaccaacgtgtcctacagagccttctca
ctccgcttttga
DBGET
integrated database retrieval system