Phycodurus eques (leafy seadragon): 133414676
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Entry
133414676 CDS
T09682
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133414676 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133414676 (ddx5)
03009 Ribosome biogenesis [BR:
pee03009
]
133414676 (ddx5)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133414676 (ddx5)
Spliceosome [BR:
pee03041
]
Complex A
U1 snRNP components
U1 related factors
133414676 (ddx5)
Complex B
133414676 (ddx5)
Ribosome biogenesis [BR:
pee03009
]
Eukaryotic type
Pre-60S particles
Helicases
133414676 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
133414676
NCBI-ProteinID:
XP_061556192
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All DBs
Position
16:9763229..9769074
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AA seq
611 aa
AA seq
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MPGYSDRDRGRDRDRDRGYGGGPHRFGGGRGGGGGGGGGKFGNPGERLRKKHWNLDELPK
FEKNFYQEHPDVSRRPLPEVEQYRRAKTITVKGRNCPNPIVNFHEASFPSYVMDVINKQN
WTEPTPIQAQGWPLALSGHDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVL
APTRELAQQVQQVAAEYGRASRLKTTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE
AGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDF
LKDYVQINVGALQLSANHNILQIVDVCSDGEKENKLIRLLEEIMSEKENKTIIFVETKRR
CDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFV
INFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNVRQASDLISVLREANQAINPKLLQ
MGEIRGGRSRGGRGGDFDRRDRYSSGRRDFGSFRDRDSSRGYDNGPNKSFSTNAQNGGYG
GNNGGSNGFSGGYNGNGQSFNNQAASFPPQNNFQAQPNGASHPPFSFPPTQAPQQHPPPL
APYPMPPQFPQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctattccgatagagaccgtggccgagacagggacagagatagaggctatggt
ggcggccctcatcgttttggtggtggccgtggtggtggtggaggaggtggtggaggaaag
ttcggcaaccccggtgaacgtttgcggaagaaacactggaatctggacgagcttcccaag
tttgagaaaaacttttaccaggagcacccagacgtctcgaggaggcctctgccagaagtt
gaacaatatagaagggccaaaacaatcaccgtgaaggggagaaactgccctaatccaatt
gtaaatttccacgaggcaagctttccatcctacgttatggatgtgatcaacaagcaaaac
tggacagagcccacccccattcaggctcagggttggcctttagcactgagtggccatgat
atggttggcattgcacaaactggttctggcaaaacgctctcgtatctgttacctgcaatt
gttcacatcaaccaccaacctttcctggagcgtggtgatggccctatttgcttggtgctg
gccccaactcgtgagctggcacagcaagtgcaacaggtggctgcagagtatggcagagct
tctcgcctcaagaccacctgcatctatggaggtgcacccaagggaccgcagattcgtgac
cttgaaagaggtgtggagatatgcattgcgactccaggcagactcattgactttcttgaa
gcgggaaagaccaacctgcgccgttgcacttacctcgtattggacgaggctgacagaatg
ctggacatgggatttgaaccacagatcaggaagattgttgaccagatcagacctgatcgg
caaacgctgatgtggagcgccacctggccaaaagaggtgcgtcagctggctgaagacttc
cttaaagactatgtgcagatcaatgttggggccctgcagctcagtgccaaccacaacatc
cttcagatagttgacgtgtgcagtgatggagagaaagagaacaaactcattcgcctgctg
gaggaaatcatgagcgagaaggagaacaagactatcatctttgttgagacaaagaggcga
tgtgatgacctcacaaggagaatgaggcgggacgggtggccagctatgggaatccatgga
gataagagccagcaggagagagattgggttcttaatgagtttaaatttggaaaggctcct
attctgatcgctacagatgttgcgtctcgtggtctagatgttgaggacgtgaaatttgtc
atcaactttgactaccccaacaactctgaggattatatccaccgcattggcagaacggcc
cgtagccaaaagactggcacggcatacaccttcttcactcccaacaacgtgcggcaggcc
agcgacctcatctctgttctacgtgaggccaaccaggccatcaaccccaagctcctccaa
atgggtgaaatcagaggaggtcgttcaaggggaggcagaggtggtgattttgaccgcagg
gatcggtattcctctggaaggagagattttggcagttttagggacagggatagcagtaga
ggctatgacaacggaccaaacaaaagctttagcacaaatgctcagaacggaggctatggg
ggcaacaacggtggtagtaatggctttagcggaggctacaatggcaatggacagtcgttt
aacaaccaggcagcatccttcccccctcagaacaactttcaagcccagccgaacggcgca
agtcaccccccattctccttccccccaacgcaagccccccagcagcatcctcccccgctc
gcgccctaccccatgccgccacagttccctcagtaa
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