Phycodurus eques (leafy seadragon): 133414710
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Entry
133414710 CDS
T09682
Symbol
ddx42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133414710 (ddx42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133414710 (ddx42)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133414710 (ddx42)
Spliceosome [BR:
pee03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
133414710 (ddx42)
Complex B
133414710 (ddx42)
Complex C
U2 SnRNP specific factors
133414710 (ddx42)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
133414710
NCBI-ProteinID:
XP_061556254
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All DBs
Position
16:complement(15184878..15199941)
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AA seq
854 aa
AA seq
DB search
MNWNKGGPGVKRGFGFGGFSLAGGKKEEPPLPQKSHGSFKPPGLSGAGSYGKSQLPSFYK
IGTKRGNFDEENAYFEDDEEESSSNADLPYIPAENSPTRLQMKSGGGSESEDDPLDAFMA
EVENQAAKDIKKIEEKSAKGVRDDIEEEDEQEAYFRYMAENPTAGLMQEEEEENVDYDSD
GNPIAPVTKKIIMPLPPIDHSEIDYPPFEKNFYNEHEELSSLTGTQVVELRQKLNLRVSG
AAPPKPCTSFAHFSFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGSGKTA
AFIWPMLVHIMDQKELEAGDGPIGVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYGGGS
MWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVSYLVFDEADRMFDMGFEYQVRSIA
SHVRPDRQTLLFSATFRKKIERLARDILIDPIRVVQGDIGEANEDVTQVVEMLPSGTDKW
SWLTRHLVEFTSSGSVLIFVTKKANSEELATNLMKEGYSLGLLHGDMDQSERNKVISDFK
KKNLPILVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTNK
DATFAGDLVRNLEGANQSVSKELMDLALQNPWFRKSRFKGGKGKKLNIGGGGLGYKERPG
LGADTSDRSTSSVLSSLSGYEGFSKPSSGAMGDRISAMRQAFQAQYKSHFVAASGNPPKL
STKSNSSSGWTSAGSLSSVPTESPNGAERAQAGAEWAQAGAERAQAVAASFAIPGFTSAG
SLSTVSAAQSNIPTASRERSDRDRERDRSGRHSDSRNGDESRRDREDRRSERDRGDDSFA
IPEPPKRRKSRWDN
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaataaaggcggtccgggcgtaaagcgaggcttcggctttgggggcttttcc
ctcgccggcgggaagaaagaggaaccaccacttccccagaaatctcacgggtcgttcaag
ccgccgggattaagcggcgctggcagctacgggaagagccaactgccgtcattctacaaa
atcggtaccaaaagaggaaattttgacgaggagaatgcgtactttgaggacgatgaggag
gagtccagcagtaacgcggacctcccgtacatcccagcggagaactcacccacccgacta
cagatgaagtccggtggaggctcggagagcgaagacgatccccttgatgcctttatggcc
gaggttgagaaccaagcggcaaaggacattaagaaaatcgaggaaaagtcggccaagggt
gttcgtgatgacattgaagaagaagatgaacaagaggcctactttcgctacatggccgag
aaccccaccgccggccttatgcaggaggaggaggaggagaacgtggactacgacagcgat
ggcaaccccattgcccctgtcaccaagaaaatcatcatgcccctgcctcctatcgaccac
tcagagattgattacccgccttttgagaagaacttctacaatgagcacgaggagctcagt
agcctgaccggaactcaggtggtcgaactacggcaaaagctcaacttgcgtgtatctggt
gccgccccgcctaaaccatgtactagcttcgcccacttcagctttgatgagcagctgatg
catcagatccgcaagtccgagtacactcagcccactcccatccagtgccagggtgtcccc
atcgcactgtcgggccgtgacatgatcggcatcgcgaaaactggcagtggcaaaacagcg
gcgtttatctggcccatgcttgtgcatatcatggaccagaaggagctggaggccggggat
gggcccatcggtgttattgtgtgccccaccagggaactctgtcagcagatccacgctgaa
tgcaagcggtttggcaaagcgtactctttgcgctcggtggcagtctacggaggaggcagc
atgtgggagcaagccaaagctctgcaggaaggcgcagagattgtggtgtgcaccccaggt
cgtctgatcgaccacgttaaaaagaaggccacgtccctgcagagagtatcctaccttgtg
tttgatgaagcagaccgcatgtttgatatgggctttgagtatcaagttagatccatcgcc
agccacgtgcgtccagacagacagacgcttctattcagcgccacgttccggaagaaaatt
gagaggctggccagggacatcctgatagatcccatccgcgtggtgcagggagacatcgga
gaggccaacgaggacgtgacgcaggtggtggagatgctgccgagcggcacggacaaatgg
agctggctgactcggcacctggtggagttcacgtccagcggctcggtgctgatctttgtc
actaagaaggccaattcggaggagctggccaccaacctgatgaaggagggctacagcctg
ggcctgcttcacggcgacatggatcagagcgagaggaacaaggtcattagtgatttcaag
aagaagaatctgcccatcctggtggccaccgacgttgccgcccgcggtctggacatccca
tccatccgcacggtggtcaactacgacgtggcgcgggacatcgacacacacacgcaccgc
atcggccggacgggtcgagccggcgagaagggcgtggcctacacccttttgacaaataag
gatgccaccttcgctggggacctggtgcgcaatctggagggcgccaaccagagcgtctcc
aaagaattgatggacttggccctgcagaatccatggtttagaaagtccagattcaaaggc
ggtaaaggaaagaagctgaacatcggtggaggaggacttggctacaaagagagaccggga
ttgggcgccgacacgtctgatcgtagcaccagcagcgtgttgtcttccttgagcggctac
gagggtttcagcaagcccagcagtggggccatgggagaccgcatatctgccatgagacaa
gccttccaggctcagtataagagtcactttgtggcggcgtccggcaacccacccaagctc
agcacaaagtccaacagctcatctggctggaccagcgccggcagcttgagctcggtgccc
acagagtcacccaacggtgccgagcgggcccaggctggcgccgagtgggctcaggctggc
gccgagcgggcccaagccgttgccgcctctttcgccattccgggcttcaccagcgccggc
tccctgagcacagtctccgccgcacagagcaacatcccgacggcctcgcgagaacgcagc
gatcgggatcgggaaagagatcgcagcggccgccatagtgacagccgtaacggagatgaa
agcaggcgggatagagaggacagaaggagcgagagggacagaggagatgatagcttcgcc
atacccgagccacccaaacgtagaaagagcaggtgggacaactaa
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