Phycodurus eques (leafy seadragon): 133414807
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Entry
133414807 CDS
T09682
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pee01001
]
133414807 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pee04054
]
133414807 (ciita)
Enzymes [BR:
pee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133414807 (ciita)
Protein kinases [BR:
pee01001
]
Serine/threonine kinases: Other
TAF1 family
133414807 (ciita)
Pattern recognition receptors [BR:
pee04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133414807 (ciita)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
AAA_16
LRR_14
nSTAND3
ATPase_2
NPHP3_N
TsaE
NB-ARC
AAA
VapE-like_dom
AAA_22
DUF815
Arf
SRP54
RsgA_GTPase
ABC_tran
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
133414807
NCBI-ProteinID:
XP_061556434
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All DBs
Position
16:12443354..12454337
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AA seq
1142 aa
AA seq
DB search
MQNTDQDPIFCPDYGALPDDLSEFMNDSYLVKMLDTDGLFSDDPMLIFDDNNFSDTPLAK
EPDSRRNQQVEKIKPTRKTTILQKRPRAATLSKHRTTGKKNSTPKKQKADGTGVGPVQSE
GELSCPSTPPQSILHLQPSIQFVTIPDITFYQFKMQTICPPVIRLPFPNAAAPAYLLVPV
PPSPSAYKLQVAPFSPEDSAVVPALMSSSPFGTLSDTTSKVMSPPCNYESVKNYIKIAKA
HMHQICEEMEPGLTLSSHFVDVQVIQREMFCSGKENNKSLHKELVSMGDMDRQKRLIKLS
QIFENSNGNKPKRYILLLGKAGMGKTTLIRKLCQDWTRDCIPQFDFVFLLNDAHLISSRK
SHYSLQSLLLDLPTFAISTINIEEVYAQVLKAPKRVLIIFDGFDDRDYEILFQEKDFTTL
LEKDTKAKAFTVRKLYSAILQRVVLPGSILLISARPRGTAYHLLRRHDSLLEASGFTPLY
IETYFSRYFDDPNLREFAWKCLEKCSYLRHLCWKPGLCRLVCLVVEHSEGSESLPRTLTE
LCHQVLCIKMKNDNWGSCTQAKPQAQIPLQSSRQDSSRAQVRKTTRWSTKGKSQITDEIK
TAHGEICEKKIMSRLSSLAWEGVKANTSILPKEVSLCSKLKTFGLRKGVFLTCQVRANKV
CSLCESEEVEGEKERILESENAERPNQQSTDFEENSVSGNDILLWTDPFVQSYLAGLHLS
MNRNVWNQNLFQNLPSISGPKGRRRPQGEVQELTRRFAFTIQFLNRTELHRLHLDINLNK
RALISEHLKGLSLADLCPDQVLEACHYVFEASFSHGNGSSDSEKAPLVTHLAANLPEFLT
FRGVPLGPPDAYVVHKILERAEKGGRGFSLDLEDTGIPISGLRSLIGLGSCSTYKACIAD
VIALWEQLEQSGEKKPLQNFVTKFKIHPLKVMQVSQIEHLSKLVNIHMHRRLSYCLREPD
PILDEGVPAVKELHKLELAIGPERGPQAIPRLWEFLPSLHDLQHLDLEGNKIGDQGAEQL
ADTFSSLCFLQILNLSQNYIGDNGVKKMVTTLKDLPKLHCLILYSNVISDEGASTLAAVL
PHMASLTDLDVKYNKLSDVGAQCLGASLKECKKMKTLRMWNQCIPYGVFERLQQQDPRIL
WH
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacacggatcaggacccaattttctgtcctgactacggagctttaccagatgat
ttatcggaattcatgaatgacagttacttggtgaagatgcttgacacggatggcctcttt
agtgatgatcccatgttaattttcgatgacaacaacttcagtgacactcccttggcaaaa
gagccagactcacgcagaaatcaacaggtagaaaaaattaaaccaacgagaaaaacaaca
attcttcaaaaaagacccagagcagctacactatcaaaacataggacaacgggaaaaaag
aattccacaccaaaaaaacaaaaagctgatggtactggcgtgggaccagtgcagagtgag
ggggaactatcgtgtccctccacaccgccacaaagcatccttcatctccaaccctccatt
cagtttgtcacaatcccagatattacattttatcagtttaagatgcaaacaatctgtcct
ccagttatcagacttccattccccaatgctgctgcaccagcatacctattagtacctgta
cctccttcgccatcagcatacaaactccaagtggcacccttttctccagaggacagtgca
gtagtacctgccctaatgagctcatccccattcggaacattgtcagacaccacaagcaaa
gtcatgtctccgccgtgcaattatgagagtgtaaagaactacattaaaatcgccaaagcc
catatgcatcaaatctgcgaggagatggagccagggctaactttgagctctcattttgtg
gatgtgcaagtgattcagagagagatgttttgctcagggaaagaaaataacaagtccctg
cacaaagaactggtgtccatgggagatatggacaggcaaaaaagattgattaagttgagt
cagatatttgagaattcgaatggaaacaaacccaaacgatatatacttctacttggcaaa
gccggcatgggaaaaaccacccttatcaggaagctatgccaggactggaccagagactgc
atcccacagtttgactttgtattcttgttgaatgacgctcatctaatctcttcaagaaaa
tcacactatagtcttcagagcctcctactcgacctgcccacctttgccatttccaccatt
aatatcgaggaagtgtacgcacaagtccttaaagcccccaaacgtgtactcatcattttt
gatggttttgatgatcgggactatgaaatactatttcaagaaaaagactttacaaccttg
ttagagaaagacactaaagcaaaggcctttacagttagaaagctatactctgccatcctc
caaagggtggtccttccaggatcaattcttctgatttctgccagaccaagaggcactgcc
taccatctattgcggcgacatgacagccttttggaggctagtggatttacccctctatat
atagaaacatatttctccaggtactttgatgaccctaatctcagagaatttgcttggaaa
tgcttagaaaagtgcagctatctacgtcacctttgttggaagcctggactctgtcgactg
gtgtgcttggttgtggaacactctgaaggttcagagagccttccaagaactttaactgag
ctctgccatcaagtactttgtattaaaatgaaaaatgacaactggggctcttgcactcag
gctaaacctcaagctcaaataccgctacagtcttcaagacaagactcaagcagagctcag
gtgagaaaaacaacaaggtggtcaacaaaggggaaaagtcaaataacagatgagattaag
actgctcatggggaaatctgtgaaaaaaaaattatgtcccgtttgagctctttggcctgg
gaaggagtgaaggccaacacatccatccttcccaaagaagtaagcttatgctcaaaactc
aagacattcgggctcaggaagggagtcttcctcacttgtcaagtgagggcaaacaaggtc
tgctccctttgtgagagtgaggaagtagaaggagagaaagaaaggatattagagagtgaa
aatgcagaaaggccaaatcaacaaagtacagactttgaagaaaattctgtcagtggcaat
gacatcttgctgtggacggatcccttcgttcagagttacctggcaggactccatttgtcc
atgaacagaaatgtttggaaccagaaccttttccagaacctaccctccatttctggccca
aagggacgtcggcgtccacaaggagaggtacaagaactaactcggcgatttgctttcacc
atccagttccttaacagaaccgagctacacaggcttcatctagacataaacctcaacaaa
cgggccttaatctctgaacatctcaagggtctttcccttgctgacctgtgccctgatcag
gtcttggaggcatgccactatgtttttgaagcaagtttctcacatggcaacgggagcagt
gacagtgaaaaagcaccattagtcactcacctggcagcaaacctacccgagttcctcaca
ttccgtggcgttccactcggcccaccagatgcatacgttgtgcacaagattcttgaaagg
gctgaaaaaggaggtagaggtttttctttggatcttgaggacactgggattccaatttca
ggactcaggtccctgattggtcttggcagctgcagtacatacaaggcatgcatagctgat
gtaattgccctgtgggagcagttagagcagagtggtgaaaagaagccgcttcaaaatttt
gtgaccaagttcaagatccaccctctgaaggtgatgcaagtgtctcaaatagaacatctg
tcaaagcttgtgaacattcatatgcacaggaggttgtcatactgtctcagagaacctgat
cccatcctagatgagggagttccagcagtcaaggagctacacaaactggagttagcgatt
ggtccagaacgtgggccccaagctatccccaggctttgggagtttctaccaagtttacat
gacctccagcacctagatttggagggcaataagattggagaccaaggagctgagcaattg
gctgatacattctcctccctctgttttctgcagatactcaatctgtcacagaattatata
ggagacaatggggtcaaaaaaatggtgactacactaaaggatttacccaaactgcactgt
ttaatcctctacagtaacgtgatttctgatgaaggtgcctccactttagccgctgtcctc
cctcacatggcatcactgactgacctagacgtgaagtataacaagctatcagatgttggt
gcacaatgcttgggagccagcctgaaggaatgtaagaaaatgaagactttgaggatgtgg
aaccaatgtattccatatggtgtatttgagaggcttcagcagcaggatcccaggatcctt
tggcattag
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