KEGG   Phycodurus eques (leafy seadragon): 133414860
Entry
133414860         CDS       T09682                                 
Symbol
casc3
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
pee  Phycodurus eques (leafy seadragon)
Pathway
pee03013  Nucleocytoplasmic transport
pee03015  mRNA surveillance pathway
pee03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pee00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133414860 (casc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    133414860 (casc3)
   03015 mRNA surveillance pathway
    133414860 (casc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pee03019]
    133414860 (casc3)
Messenger RNA biogenesis [BR:pee03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     133414860 (casc3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 133414860
NCBI-ProteinID: XP_061556520
LinkDB
Position
16:complement(23835929..23844261)
AA seq 706 aa
MADRRRRRRRASQDSDDDDDDESGSSSGAESRESGSQTSKGRGGREPEPAEVASERIEAK
EEVASECESEDGAGEAVLSDYDSADPEENASHSEGGEEEEGADGFSDKEAPAAASQSKLS
APAQPAPAEANEEREERSKVEKELEEKGKSAGERQSGDGQESTEDPEIKAGGQSGQQLDD
DEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEEQAPKSR
EELIASYGYDIRNGERTFVHRRPRSSVSPNREQWWRDGGERAVRSWQSSRGGRGGGSLAR
GGPPHRASPASVPLVASQRGNTTRGRPPHLPAQPQYGGSDSHAPLLHPRERVGPKALPVP
AAAGRGSRSGGGRAGEDPPVSKDSEDDRPLSTGTPSVNQVAYRSTSSTQQLQEKRGGAAQ
PPHASVAPQEASPPAERPVERKSYSLARRSRSRPAELGGKQTSVEEVAVAEVKNPVGGGG
MAELDQDVARLSLVSGQSWNQNPASYVHSEIRSLRGGLPIPSGRPPFSGLDEMSGGSNRA
KRYSSQRQRGVAEAAPLHIGVMEGHYYEPMTYQGPIFTHGEASAPVAPQGILVQPEMHIP
HPGLHPHQSGGPIPNPALYGGPPVSLPPGQPQQLLPPPFYPPPGVMTFPYPAMYPSPQGQ
SQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPEVPFALE
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcggcggaggaggcgcgcgtcccaggacagcgatgacgatgacgac
gacgagtccggttcctcttcgggcgcggagagccgtgaatcaggctcccagacgagcaag
ggccgcggcggcagagagcctgaaccggcagaggtcgcttccgagcggatcgaggccaag
gaggaagtggcgtccgagtgtgagagcgaagatggagcaggagaagctgtcctctcagac
tacgacagcgccgatccggaagaaaacgcctcccactcggagggaggagaggaggaggag
ggcgcggatggattcagcgataaagaagctccggcagcggccagccagtccaaactttcc
gctccggcccaaccggcgccagcagaggccaatgaagagagggaagagcggagtaaagtg
gagaaggagttagaggaaaaaggaaagtcggcaggagagcggcagagcggcgacggtcag
gagtccaccgaggaccctgaaatcaaagcaggaggacagtccgggcagcagctggacgac
gacgaggaccgcaaaaacccggcttacatccctcgtaagggtctcttcttcgagcacgac
gtcagaggccacgcccaggaggaggaaaggcccaaaggcagaaacaggaagctgtggaag
gatgaagggcgctgggagcacgacaagttccgcgaggaggagcaagcgcccaagagccgt
gaggagctcatcgccagctacggttacgacatccggaacggcgagcgcacttttgtccat
cgccggcctcggtcatctgtgtcccccaacagggagcagtggtggcgggacgggggggag
cgagcagtgcgctcttggcagagcagtcgaggaggaagaggaggagggagtcttgcccga
ggtggtcctccccatcgtgcttctcccgcttctgtcccacttgtggccagccagcgtggt
aacaccacccgcggccgaccaccccacctcccggcacagccccagtacggggggagcgac
tcgcacgcgcctctgcttcatccgcgagaaagagtaggtcctaaagccctgcctgtgcca
gcggcggccggcaggggaagccgtagcggcggtgggagggctggggaggacccgccagtc
agcaaagatagtgaagacgaccgcccgctgagtaccggaaccccgtccgttaaccaggtg
gcatatcggagcacgtcgtctacgcaacagctgcaggaaaaacgagggggtgccgctcaa
cccccccatgcgtcagtggccccccaggaagcctctcctcccgccgaacggcccgttgag
cgaaagtcgtactcgctggcccgcaggagtcgctcccggccggccgagctgggcggcaaa
cagacgtccgtggaggaggtagcggtggcggaagtgaagaacccagtggggggcggaggc
atggccgagctggaccaggacgtggcccgactgagtctggtgtctggacagagctggaac
cagaaccctgcttcctacgtacactctgagatcagaagcttgagaggcggcttgcccatc
ccgtccggtcggcctccgttctcaggtttggacgagatgtcaggcggctccaaccgcgcc
aagcgttactcctcccagcggcaaagaggtgtggccgaggcggcccccctgcacatcggc
gtcatggagggacactactacgaacccatgacgtaccagggaccaattttcacgcatggc
gaagcctcggcccccgtcgcaccccaaggcatactggtccaacccgagatgcacatcccc
catcctggactacatccccaccagtcgggaggccccataccaaaccccgccctctacgga
gggccgcctgtatctctgccaccagggcaaccgcaacaacttttgccgccgcctttctac
cctccgccaggggtcatgaccttcccttacccagccatgtacccgagccctcagggtcaa
tcgcaggtgacgtacgggggcgtgacctattacgacacgatgcaacagcaggctcagccc
aaaccgtcgccgccccgccgcacgtcccaacccgttactgtcaagccccctcctcccgaa
gtgccctttgcattggagtga

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