Phycodurus eques (leafy seadragon): 133414860
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Entry
133414860 CDS
T09682
Symbol
casc3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03013
Nucleocytoplasmic transport
pee03015
mRNA surveillance pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133414860 (casc3)
09122 Translation
03013 Nucleocytoplasmic transport
133414860 (casc3)
03015 mRNA surveillance pathway
133414860 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133414860 (casc3)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133414860 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
133414860
NCBI-ProteinID:
XP_061556520
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All DBs
Position
16:complement(23835929..23844261)
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AA seq
706 aa
AA seq
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MADRRRRRRRASQDSDDDDDDESGSSSGAESRESGSQTSKGRGGREPEPAEVASERIEAK
EEVASECESEDGAGEAVLSDYDSADPEENASHSEGGEEEEGADGFSDKEAPAAASQSKLS
APAQPAPAEANEEREERSKVEKELEEKGKSAGERQSGDGQESTEDPEIKAGGQSGQQLDD
DEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEEQAPKSR
EELIASYGYDIRNGERTFVHRRPRSSVSPNREQWWRDGGERAVRSWQSSRGGRGGGSLAR
GGPPHRASPASVPLVASQRGNTTRGRPPHLPAQPQYGGSDSHAPLLHPRERVGPKALPVP
AAAGRGSRSGGGRAGEDPPVSKDSEDDRPLSTGTPSVNQVAYRSTSSTQQLQEKRGGAAQ
PPHASVAPQEASPPAERPVERKSYSLARRSRSRPAELGGKQTSVEEVAVAEVKNPVGGGG
MAELDQDVARLSLVSGQSWNQNPASYVHSEIRSLRGGLPIPSGRPPFSGLDEMSGGSNRA
KRYSSQRQRGVAEAAPLHIGVMEGHYYEPMTYQGPIFTHGEASAPVAPQGILVQPEMHIP
HPGLHPHQSGGPIPNPALYGGPPVSLPPGQPQQLLPPPFYPPPGVMTFPYPAMYPSPQGQ
SQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPEVPFALE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcggaggaggcgcgcgtcccaggacagcgatgacgatgacgac
gacgagtccggttcctcttcgggcgcggagagccgtgaatcaggctcccagacgagcaag
ggccgcggcggcagagagcctgaaccggcagaggtcgcttccgagcggatcgaggccaag
gaggaagtggcgtccgagtgtgagagcgaagatggagcaggagaagctgtcctctcagac
tacgacagcgccgatccggaagaaaacgcctcccactcggagggaggagaggaggaggag
ggcgcggatggattcagcgataaagaagctccggcagcggccagccagtccaaactttcc
gctccggcccaaccggcgccagcagaggccaatgaagagagggaagagcggagtaaagtg
gagaaggagttagaggaaaaaggaaagtcggcaggagagcggcagagcggcgacggtcag
gagtccaccgaggaccctgaaatcaaagcaggaggacagtccgggcagcagctggacgac
gacgaggaccgcaaaaacccggcttacatccctcgtaagggtctcttcttcgagcacgac
gtcagaggccacgcccaggaggaggaaaggcccaaaggcagaaacaggaagctgtggaag
gatgaagggcgctgggagcacgacaagttccgcgaggaggagcaagcgcccaagagccgt
gaggagctcatcgccagctacggttacgacatccggaacggcgagcgcacttttgtccat
cgccggcctcggtcatctgtgtcccccaacagggagcagtggtggcgggacgggggggag
cgagcagtgcgctcttggcagagcagtcgaggaggaagaggaggagggagtcttgcccga
ggtggtcctccccatcgtgcttctcccgcttctgtcccacttgtggccagccagcgtggt
aacaccacccgcggccgaccaccccacctcccggcacagccccagtacggggggagcgac
tcgcacgcgcctctgcttcatccgcgagaaagagtaggtcctaaagccctgcctgtgcca
gcggcggccggcaggggaagccgtagcggcggtgggagggctggggaggacccgccagtc
agcaaagatagtgaagacgaccgcccgctgagtaccggaaccccgtccgttaaccaggtg
gcatatcggagcacgtcgtctacgcaacagctgcaggaaaaacgagggggtgccgctcaa
cccccccatgcgtcagtggccccccaggaagcctctcctcccgccgaacggcccgttgag
cgaaagtcgtactcgctggcccgcaggagtcgctcccggccggccgagctgggcggcaaa
cagacgtccgtggaggaggtagcggtggcggaagtgaagaacccagtggggggcggaggc
atggccgagctggaccaggacgtggcccgactgagtctggtgtctggacagagctggaac
cagaaccctgcttcctacgtacactctgagatcagaagcttgagaggcggcttgcccatc
ccgtccggtcggcctccgttctcaggtttggacgagatgtcaggcggctccaaccgcgcc
aagcgttactcctcccagcggcaaagaggtgtggccgaggcggcccccctgcacatcggc
gtcatggagggacactactacgaacccatgacgtaccagggaccaattttcacgcatggc
gaagcctcggcccccgtcgcaccccaaggcatactggtccaacccgagatgcacatcccc
catcctggactacatccccaccagtcgggaggccccataccaaaccccgccctctacgga
gggccgcctgtatctctgccaccagggcaaccgcaacaacttttgccgccgcctttctac
cctccgccaggggtcatgaccttcccttacccagccatgtacccgagccctcagggtcaa
tcgcaggtgacgtacgggggcgtgacctattacgacacgatgcaacagcaggctcagccc
aaaccgtcgccgccccgccgcacgtcccaacccgttactgtcaagccccctcctcccgaa
gtgccctttgcattggagtga
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