Phycodurus eques (leafy seadragon): 133415601
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Entry
133415601 CDS
T09682
Symbol
scaf4a
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133415601 (scaf4a)
03041 Spliceosome [BR:
pee03041
]
133415601 (scaf4a)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133415601 (scaf4a)
Spliceosome [BR:
pee03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
133415601 (scaf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
133415601
NCBI-ProteinID:
XP_061557733
LinkDB
All DBs
Position
17:13103313..13117065
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AA seq
960 aa
AA seq
DB search
MDAVNAFNQELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKSEYKV
AGLYVVDSIVRQSRHQFGPDKDVFGPRFTKNIVGTFENLCLCPLEDRSKLVRVLNLWQKN
GVFKSNVIQPLLDMAAGTSSGPAPHAGSCPAPYAEDPASSPPTPTKDQAAAAHSAPPQKQ
DPFTAVAQLFQSTHGQQLQQMLQNFQQQPVQAEPTPQPPPAPHSDTSSVSPVFSNVLTHP
SQAAQQKTAFDKTLLDRFDYDDEPEGGDYAKDNVSQPFDSMQPPQALQPPVMSMTQDFSQ
QGPLPPNGQLPSYGLMPGQGFTGMIPQMGHVPPGQPFPGSVGHPGFPGVYPPPPHSAQQQ
QDSTVDADRSSMRDGRHGQTSRSGSRSPKRRRSRSNSRTRRSRHRRSRSRDRRHHSPRSR
SQERRDRERERERRQKGLPPPKNETLSICSTTLWVGQLDKRTQQQDVACLLEEFGQIDSI
NMIPPRGCAYIVMIHRQDAFRALQKLSRGSSKVNQKAIKIAWALNKGIKADLKQFWDVEL
GVTYVPWSKVREEQLEELKEGGTLDLDTLSPEWSTVKKALENPEELTHNGGDDSQQPEDA
HVLAPLPPTQVPPMQQPMLGMGSVPPPCFPAPMGMPPPSFPPGMPPPPFIRPGFNPMQMP
PGFPPPGAMPLSMPPPPSKGEDMPLVSRKHDELLDAPNFYNNQMGAMCNQVGIPPGGSIQ
PPTGGLLGARPGLIPLQRPPGPPLLHAQRFPLPPVPPPMVPRGPHHPPLMRHDAPPPKGT
FAIPHTMRPPFPPHGPPPQGPPLPPFLRPGAPRAVEDEEVRPFRAERPGFRERDREPERE
RGFSGAARRPFGGDRLDARDRLDGGGWDRDRRDWRDRGEWENGSREAREKGKEGERPKRR
ERTTRWDRNDRLAELDNMDKLRTPDAIAEAPQKTDESAPPAAESPGAPPPPVEAEQEAVS
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagttattctccttgatggactctaagccgcca
atatctcgcgccaagatgatctccatcaccaaatcggccattaaggctatgaaactctac
aagcacgtggtccagattgtggagaagttcattaaaaagtgtaagtctgagtacaaggtg
gcaggcctgtatgtggtggattccatcgtccgccagtcgaggcaccagtttggccctgac
aaggatgtgtttggaccccgcttcaccaaaaacattgtgggcacctttgagaacctttgc
ctctgcccgctggaggacagaagtaagctggtgcgcgtactgaacctatggcaaaagaac
ggcgtattcaagagcaacgtcattcagcccctcctggacatggccgctggcaccagcagc
ggcccggcgcctcacgccggcagctgccctgcgccttacgcagaagatccagcttcctct
ccgccgaccccgaccaaagaccaggcggccgcggcacacagtgctccgccgcaaaagcag
gaccccttcactgctgtggcgcagctcttccagtccacgcatggtcaacagctccagcag
atgcttcagaacttccaacagcagcctgtgcaagcagaacccacccctcagcctccaccc
gccccccactccgacacctcaagcgtctctcccgttttcagcaatgtcctcacacatcct
tcccaggccgcccagcagaagactgcatttgacaagacattattggatcgttttgactac
gacgacgaacctgaaggcggagactacgccaaggacaatgtctcgcagccctttgacagt
atgcagccgccccaagccttgcagccacctgtgatgagcatgactcaggacttctcacag
cagggtcctctccctcccaacggccagctcccgtcttatgggctaatgccaggacaaggc
ttcacaggaatgatacctcagatggggcacgttccaccgggccaacccttccctggttct
gtgggacatcctggattcccaggagtttatcctcctcctcctcactcggcccagcaacag
caggattcaactgttgatgcagaccggtcctccatgagggatggcagacatggtcaaacg
tcacgatcaggctccaggtccccgaaaaggaggcgatcgcggtccaattcccgcacgcgt
cgttcccgtcaccggcgctcacgctcgcgggaccgacgccaccattccccgcgctctcgc
tcgcaggaacgccgggacagggaacgtgaacgggagcggcgacaaaaaggtctcccgccg
cccaaaaatgagacgctgagcatctgcagtacaactctatgggtgggccagctggacaag
aggactcagcagcaggatgtggcgtgtttgctggaggagtttggacagatcgactccatc
aacatgattcctccacgaggctgtgcctacatcgtcatgatccaccgacaggacgccttc
agggccctgcagaagctcagtcgaggctcctccaaagtcaaccaaaaagccatcaagata
gcttgggctctgaacaaaggcatcaaggccgatttgaagcagttctgggatgtggagctt
ggtgtcacctatgtgccctggtccaaagtcagggaggagcagctggaggagctcaaggaa
ggaggaaccctggatttggacactttatcgccagagtggagcactgtaaagaaagctctg
gagaacccagaggagctcacccacaacggtggagatgattcgcagcagcccgaggatgcc
cacgtgttggctccgcttcctcctacacaggttcctccgatgcagcagccgatgctcggc
atgggctcggtgccaccaccctgtttccccgctcccatgggcatgccgccaccttccttc
ccaccgggcatgcccccaccaccattcattagaccaggcttcaacccgatgcagatgcct
ccaggtttccccccaccaggggccatgcctctgtccatgccgccgccgccctccaaaggt
gaagacatgcctctggtcagcaggaaacatgatgagctcctggacgctccaaacttctac
aacaaccagatgggagccatgtgtaaccaggtgggcatccccccaggtggcagcatccag
cccccgacagggggtctgctgggagcccggcccggtttgatcccgctgcagcgccccccg
ggccctcctctgctgcacgcacagcgtttcccactgccgcccgtcccgcctccgatggtg
cccagagggccccaccacccgcccctaatgcgccacgacgcccctccgcccaaaggaaca
tttgcgataccccacaccatgagaccgcccttcccgccccacgggccgccccctcaaggt
ccccccttgcctcctttccttagacccggtgccccgcgtgcggtcgaggacgaggaggtc
cgccctttccgggctgaacgcccgggattcagggagcgggaccgcgagccggagagagag
cgaggattcagcggtgcggcgaggcgcccgtttggcggtgaccgcttagacgcgagggac
aggctggacgggggcggatgggaccgagacagacgggactggcgggaccggggagagtgg
gagaacggcagcagggaagcccgggagaaagggaaagaaggggagcggcccaagcggcgg
gagagaaccacccggtgggaccgcaacgaccgcttggccgagctggacaacatggacaag
cttcggacccctgacgccatcgccgaagcgccccaaaaaactgacgagtcggcgcctcct
gctgccgagtccccgggggcgccgccaccccccgtcgaagccgaacaggaagctgtgtcg
tag
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