Phycodurus eques (leafy seadragon): 133415606
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Entry
133415606 CDS
T09682
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03030
DNA replication
pee03420
Nucleotide excision repair
pee03430
Mismatch repair
pee03440
Homologous recombination
pee03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133415606
03420 Nucleotide excision repair
133415606
03430 Mismatch repair
133415606
03440 Homologous recombination
133415606
03460 Fanconi anemia pathway
133415606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pee03000
]
133415606
03032 DNA replication proteins [BR:
pee03032
]
133415606
03400 DNA repair and recombination proteins [BR:
pee03400
]
133415606
Transcription factors [BR:
pee03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133415606
DNA replication proteins [BR:
pee03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
133415606
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
133415606
MMR (mismatch excision repair)
133415606
DSBR (double strand breaks repair)
HR (homologous recombination)
133415606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF223
Zn_ribbon_RRN7
DUF8512
Motif
Other DBs
NCBI-GeneID:
133415606
NCBI-ProteinID:
XP_061557743
LinkDB
All DBs
Position
17:complement(18160455..18183530)
Genome browser
AA seq
674 aa
AA seq
DB search
MSVNLTAGAIEDLFNESPVINPVLQVMYIREYPPGKQGHTRYRLNLSDGVRSSSCFLLAS
QLNHLKEAELLAPNCVCMLKKTISSYLGHKRVLVVVDMDVLQTAADAGGNIGNPTQLIGQ
TTGQQEANPSTSSSDEIPGPSGYGTSGSCENSQMKSSPMKSSWKASPMKASGMMSSMKAS
GMPSPMKASPVKGSGIVSPMEASPVKGSGMPSPMKASPVKGSGMSFPMQASTSSSPSQRP
TKLTPIYHLSPYLSNWTVRARVTNKSDIRNWSNSRGEGKVFNFEVLDESGEIRITAFNSE
VDKFFSLVEQNKVYLISKGSLKVANKQYTSLKNDYEITLEANSCIVPCEDSQGVPTVHCD
FVPISQLEGKDPEAIIDVIGVCEEAEDVSLITTKAGKQLTKRELVLSDSSGKMVMLTLWG
DQAQKFNASCHPVVAVKGARLSTFGGRSLSAFFCSTVMVNPDIPEAFELRAWYNQVGHGL
CSQSLTEVQFTSGEFRTNWKSLSDVKTEQLGHGEKADYFSCVATVVFARKENCLYRACPS
ESCNKKVQEQDDGRYHCDKCGKDYPDFKYRFMLSVNLADFGDNVWATCFQDTAETLLGLG
ADRLGRLKDTDEDAFNEVFQKVHFSKHIFRSRVKLETYNDECRVKVTVMEVLPVDHRQHS
RRLLNSIRTLACGN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttaacctcacggcaggggcgattgaggacctctttaacgagtctccggtcata
aatccagttctgcaggttatgtacatccgtgagtaccctcccgggaaacaaggacacacc
aggtaccgcctgaacctgagcgacggcgtgcgcagttcttcctgcttcctgctggcgtca
cagttgaaccacctgaaggaagcggagctgctggcgcctaactgcgtgtgcatgctcaag
aagaccatctcctcgtatttgggccacaagcgggttctggtggtggtggacatggacgtg
ttacagactgctgcggatgccggaggaaatatcgggaatcccacacagttaatcggtcaa
accaccggccagcaggaggcaaacccgagcacctccagttccgatgaaataccaggaccc
tctggatacggcacaagcggcagttgtgaaaactcccagatgaagagttctccaatgaag
agctcttggaaagcttctcccatgaaggcatctgggatgatgtcctccatgaaggcatct
gggatgccgtcccccatgaaggcatcgcctgtgaagggttctgggatagtgtcccccatg
gaggcatcgcctgtgaagggttctgggatgccgtcccccatgaaggcatcgcctgtgaag
ggttctgggatgtcgttccccatgcaggcgtcgacctcttccagtccttcccagaggcca
accaaattgaccccaatataccatctcagcccgtacttgagcaattggaccgtcagagcc
cgagtgaccaacaagtctgatatccgcaattggagcaactcgagaggggaggggaaggtc
ttcaactttgaggtcctggacgagagtggagaaatcaggatcacggccttcaacagtgaa
gtggacaagtttttctccctggtggagcaaaacaaggtctatctgatctccaaaggctcg
ctgaaggtggccaacaagcagtacacgtcgctgaagaacgactacgagatcacgctggag
gccaactcgtgcatcgtgccgtgcgaggacagccagggcgtgcccaccgtgcactgcgac
tttgtgcccatctcgcagctggagggcaaagaccccgaagccatcattgacgtgattggt
gtgtgcgaggaggccgaggacgtgtccctgatcaccaccaaggccggcaagcagctcacc
aagagggagctcgtgctgtccgactctagcgggaagatggtgatgctcacattgtgggga
gaccaggctcagaagtttaacgcctcctgtcacccggtggtggccgtcaaaggggctcgc
ctgtcgaccttcggcggccgttcgctgtctgcgttcttctgctccacggtgatggtcaac
cccgacatccccgaggcctttgagctgagagcctggtacaaccaggtaggccacggcctg
tgcagtcagtccttgactgaggtccagttcacaagcggcgaattcaggaccaactggaag
tctctgagcgacgtcaagacggaacaactgggacatggcgagaaggcggactacttcagc
tgcgtggcgacggtggtgttcgcccgcaaggagaactgcctttaccgggcgtgtccaagc
gagtcctgcaacaagaaggttcaggagcaggacgacggacgctaccactgcgacaaatgt
ggcaaggactaccccgactttaagtaccgtttcatgctctctgtgaacttggccgacttc
ggggacaacgtgtgggccacgtgcttccaggatacggcggagaccttgctaggtctcggt
gctgaccgactcggacgtctgaaggacacagatgaggacgcgttcaatgaggtttttcaa
aaagtccacttcagcaagcacatcttcaggagtagagtcaagctggagacatacaacgat
gagtgtcgcgtgaaggtgactgtgatggaagtcctcccggtggaccaccggcagcacagc
aggaggctgctgaacagcatccgcacgttggcctgcggtaactga
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integrated database retrieval system
