Phycodurus eques (leafy seadragon): 133415623
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Entry
133415623 CDS
T09682
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03013
Nucleocytoplasmic transport
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133415623 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
133415623 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133415623 (thoc2)
03041 Spliceosome [BR:
pee03041
]
133415623 (thoc2)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133415623 (thoc2)
Spliceosome [BR:
pee03041
]
Complex C
Other components
EJC/TREX
133415623 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133415623 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
133415623
NCBI-ProteinID:
XP_061557779
LinkDB
All DBs
Position
17:complement(20346515..20365493)
Genome browser
AA seq
1561 aa
AA seq
DB search
MATLILPGEWVKNWEKSGKHEFVQLCKRLTEKIDHGCQIKDVQAALYELCWQGVQGNLKL
DLVASVLGEMMELRDDMPSILADVFSVLDLETVALEEKHKRDHYIQLVGACLIFVPDAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHIVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDDFFLSLIKSYMCEALTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLLPLDSAIVEEHKLVISE
AKQIARKLVMVVVPSDKSEDKEKEKEKEEEKIAQPPDNQKLGLLEALLGIGDWHHAQSIM
DQMPSFYATSHKFIALALCQLLHLTVEPLYRTAGLPKGARGCVMHPLKNKRAPKPAESFE
DLRRETFSMLGYLGPHLAHDPILFAKIVRLGKAFMKEYQCSEGLDIKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGFFKLFPYHHRYRLYGQWKNETYSSHPLLVKVKAQTV
EGARYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIGPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEVTDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDVLLDHELALPLCVLMVQQRNGVVFLESGDKDLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPAIDVLCNQFHTPHDAAFFLSRPMYAHQISSKYDELKKAEKGNRQQQKV
QKYVAACEQVMTPVHEAVMSLHPARVWEDLRPQFYATFWSLTMYDLAVPHAAYEREVNKL
KAQIKAIDENPEIPMNKKKKEKERCTALQEKLQEEEKKQQEHVQRVLHRLKLEKDKWLMT
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQMTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAVYEKECGNYPGFLTILRASGFDGGQQAN
PLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLIKILPCYPKVLNLGQALEY
RVHKICVKEKEKRPDLYALAMGYSGRLKSQKVRMVPENEFHHKEPPARNVTPASQQNGPG
TTGKPATAMMKGEDGFSEDGDRGKDKSQTTKPVNKANTAAAKVTTSNGNGALNSIKTIKE
RDDKEKSGKDKKEKKEKTPGTTPETKAEARREKLREERAGKDERAVREGKEKTPKADRDK
VKAEEKNKDDKTKAGNGESVEPSRERDAIKESKSKEKGDRSAVAGCRKSPVPRSDVADTE
RDHKRRKLDSHSSPSHSSSVKDNNNDPKESASKHHLNYNSVARSKSRERELEKNELENAV
GRSKEKKEEKERKERKRDVGVGEREVSLEPKRRKDENGTNSSKNSQCESPCDSPLSVEKE
KSKRSKSSSKEKGDSAKPERTSTGGKKESRHDKDKSEKKEKRDSSGGKEEKKHHKSSDKH
R
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatgggtgaagaattgggagaaatcgggaaaacac
gaattcgtacaactctgcaaaagactaacagagaaaatagatcatggatgtcagataaaa
gatgtccaggcggccttatatgagctctgctggcaaggtgtacagggcaacctcaagttg
gacctcgtcgccagcgtcctcggcgagatgatggaactgcgcgatgacatgccatcgatt
ttagctgatgtctttagtgtgctagatttagagaccgttgcactggaagaaaaacacaaa
cgtgaccattacatccagttagtgggcgcatgtttgatttttgttccagatgccatctta
aaagagcgtctggatccagaaacacttgaatctcttggacttataaaacaagcccatcaa
tttaatcaaaagatcgtcaagatcaagacaaaactattttacaagcaacagaagttcaac
ttgttaagggaggaaaacgagggctacgccaaactaatcacagagcttggccaagacctg
tctggcaacatcaccagccacattgtattggaaagcatcaagtctctcatcggatgtttc
aatttagatcctaaccgtgttttggacatcatcctggaggtgtatgagagccgatcagac
caagatgacttcttcctgtccctcatcaagtcctacatgtgcgaggcactgactctctgc
cacatccttggctttaagttcaaattttatcaggaaccaaatgaggaaacccctaagtca
ctataccacattgctgctgctctacttcatcataacctgatagaattggaagatctctat
gtacatcttttgccactagattccgccattgtggaggaacacaaactcgttatttcagag
gccaagcagattgctcgcaagctggtcatggttgtagtgccttcggacaaaagtgaagac
aaggaaaaagagaaagaaaaggaggaagagaagattgcgcagccacctgataaccagaag
cttggtttgctggaagcacttctcgggattggagactggcaccatgcacagagcataatg
gaccagatgccttccttctatgctacttctcataagttcattgcactggcactctgtcag
ctgttgcatctgactgtggagcctctttaccgaacggctggcctcccaaaaggcgcacgg
ggatgtgtgatgcatccactgaagaataagcgggcccctaagcctgcagagagctttgaa
gacttgcgcagggaaacattcagcatgctcggctacctgggtcctcatctcgcgcatgac
cccatcctcttcgccaagatcgtgcgccttggcaaggcattcatgaaagagtaccagtgc
agtgagggcttggatataaaagataaaatggaaacactattgagttgtttcctgagcatt
gcagaccaagtgttactcccatccctctcgctgatggagtgtaatgcgtgtatgtctgag
gagctgtggggtttctttaagctttttccctaccatcacaggtaccgcctgtatggacaa
tggaaaaatgaaacgtattccagccaccccctgctggtaaaagtcaaagctcagactgtg
gaaggggctagatacattatgaagcgcttgaccaaagagaatgtgaaacaatctggaagg
cagatcggcaaactaagccacagcaaccccaccatcctttttgattatatgctgtcacag
atccagtggtacgataacctcattggtccagttgtggattccctgaaatacctcacatcc
ctcaactacgatgtcttggcctattgcattatcgaagctctggccaatcctgagaaggag
aagatgaagcatgacgacaccacaatctcatcatggctacaaagcctggcaagtttgtgt
ggagctgtgttcaggaaatatccaattgaattggctggtcttcttcagtatgtcaccaat
cagctaaaagcagggaaaagttttgacctgctgatcctgaaggaagtggtgcagaaaatg
gctggcatagaagtcacagatgaaatgacatcagagcagcttgaagcaatgacaggaggg
gaacaactcaaagctgagggtggctactttggtcagattaggaacactaaaaagtcatcc
caacgtcttaaggatgtgctacttgatcatgaactggccctgccgctttgcgtactcatg
gtacagcaaagaaatggtgtggtgttcctagaaagtggagacaaagatctcaaactggtc
ggccacttgtatgaccagtgtcatgacacactggtgcagtttggtggcttcctggcctcc
aacctcagcacagaggactacatcaagcgtgttcccgccattgacgtcctttgtaaccag
ttccatacgccacacgatgctgcgttcttcctttctcggccaatgtacgcccatcaaata
tcgtcaaaatatgacgagctgaagaaagcagagaaaggcaaccggcagcagcagaaggtg
cagaagtacgtggcagcctgcgaacaagtaatgacaccagtgcacgaggcagtgatgtcc
ctccatccagcccgcgtttgggaagacctccgcccccagttctatgccaccttctggtct
cttaccatgtatgacctggcggtgccccatgcggcctatgagcgtgaggtcaacaagctc
aaggcccagatcaaagctattgacgagaatcctgaaatccctatgaataagaaaaagaaa
gagaaggaacgctgcaccgctctgcaggaaaaactgcaggaggaggagaaaaagcaacag
gagcacgttcaaagggtgctccatcgcctcaaactggagaaagacaaatggttgatgacc
aaatctaccaagaatgagaccataacgaagttcctgcagctgtgtctgttccctcgctgc
atcttctcttccatcgacgcggtttactgtgcccgttttgtcgagctagttcaccaacag
atgacgcccaacttctgcactctgctgtgctacgacagggtgttctcagcaatcatttac
actgtggccagttgtacggaaaatgagtctcaccgatatgggcgcttcctctgctgcatg
ctcgagacggtgacccgctggcacagcgatcgtgccgtctatgagaaggagtgtggaaat
taccccggcttcctgactattttgcgagcctcaggcttcgatggaggccaacaagccaat
ccactcgattatgagaacttcaggcatgtggtgcacaaatggcattacatgttgacaaaa
gcttcagtacactgcctggaaactggagattacacccacattcgaaacatccttattgtt
ctcatcaaaatcctgccatgttaccccaaggttttgaatctgggccaagcgctggagtac
cgtgtccacaagatctgcgttaaggagaaggagaagaggccagacctctatgccttagcg
atgggctattcaggtcgattgaaaagccagaaggtgcgcatggttcctgagaatgagttt
caccataaagagccaccagctcgcaatgtcactcctgccagtcagcagaatggacccggc
accacgggcaagcctgccacagccatgatgaagggagaggatgggttctcagaagatggt
gaccgggggaaggataaatctcagactaccaaaccagtaaacaaagccaacactgcagca
gctaaagtgaccaccagcaatgggaatggtgctcttaacagcatcaaaaccataaaagag
cgggacgacaaagagaagagtggcaaggacaaaaaagagaaaaaggaaaagacaccaggc
accactcctgaaacaaaggcagaagcccgccgagaaaagctgagagaggagagagcagga
aaagatgagcgggcggttcgtgagggtaaggagaagacacccaaggcagaccgagacaaa
gtcaaggctgaggagaagaacaaagatgacaagaccaaagcgggcaacggggagtccgtg
gagccttccagagagcgcgatgccatcaaggagtcgaagagcaaggagaaaggagacagg
agcgcagtggccggctgccgcaagtccccagttcccagatcagacgtagctgatactgag
agggatcacaaaagacgaaagctcgacagtcactcttctccatcccactcctcgtctgtt
aaggacaataacaacgatcccaaggagtccgcatccaagcaccacctcaactacaattca
gtagcacggtccaaaagcagagagagggagctggagaagaacgaacttgagaatgcggtt
ggccgaagcaaagagaagaaagaagaaaaggagcgcaaagagaggaagagagacgtcggt
gtcggtgagcgtgaggtcagcctcgaacccaaacgcagaaaggacgagaacggaaccaac
tcctccaaaaacagccagtgcgagagtccttgcgactctccgctctcggtggagaaagag
aagagcaagagatccaaatcttctagcaaagagaagggcgactccgccaaacccgagcga
acgtctaccggaggaaaaaaggaatcccgacacgataaagacaagtctgaaaagaaagag
aagcgggacagcagcggaggaaaggaggagaaaaaacaccataagtcctctgacaagcac
agatga
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integrated database retrieval system