KEGG   Phycodurus eques (leafy seadragon): 133415623
Entry
133415623         CDS       T09682                                 
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
pee  Phycodurus eques (leafy seadragon)
Pathway
pee03013  Nucleocytoplasmic transport
pee03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pee00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133415623 (thoc2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    133415623 (thoc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pee03019]
    133415623 (thoc2)
   03041 Spliceosome [BR:pee03041]
    133415623 (thoc2)
Messenger RNA biogenesis [BR:pee03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     133415623 (thoc2)
Spliceosome [BR:pee03041]
 Complex C
  Other components
   EJC/TREX
    133415623 (thoc2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    133415623 (thoc2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 133415623
NCBI-ProteinID: XP_061557779
LinkDB
Position
17:complement(20346515..20365493)
AA seq 1561 aa
MATLILPGEWVKNWEKSGKHEFVQLCKRLTEKIDHGCQIKDVQAALYELCWQGVQGNLKL
DLVASVLGEMMELRDDMPSILADVFSVLDLETVALEEKHKRDHYIQLVGACLIFVPDAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHIVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDDFFLSLIKSYMCEALTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLLPLDSAIVEEHKLVISE
AKQIARKLVMVVVPSDKSEDKEKEKEKEEEKIAQPPDNQKLGLLEALLGIGDWHHAQSIM
DQMPSFYATSHKFIALALCQLLHLTVEPLYRTAGLPKGARGCVMHPLKNKRAPKPAESFE
DLRRETFSMLGYLGPHLAHDPILFAKIVRLGKAFMKEYQCSEGLDIKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGFFKLFPYHHRYRLYGQWKNETYSSHPLLVKVKAQTV
EGARYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIGPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEVTDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDVLLDHELALPLCVLMVQQRNGVVFLESGDKDLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPAIDVLCNQFHTPHDAAFFLSRPMYAHQISSKYDELKKAEKGNRQQQKV
QKYVAACEQVMTPVHEAVMSLHPARVWEDLRPQFYATFWSLTMYDLAVPHAAYEREVNKL
KAQIKAIDENPEIPMNKKKKEKERCTALQEKLQEEEKKQQEHVQRVLHRLKLEKDKWLMT
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQMTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAVYEKECGNYPGFLTILRASGFDGGQQAN
PLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLIKILPCYPKVLNLGQALEY
RVHKICVKEKEKRPDLYALAMGYSGRLKSQKVRMVPENEFHHKEPPARNVTPASQQNGPG
TTGKPATAMMKGEDGFSEDGDRGKDKSQTTKPVNKANTAAAKVTTSNGNGALNSIKTIKE
RDDKEKSGKDKKEKKEKTPGTTPETKAEARREKLREERAGKDERAVREGKEKTPKADRDK
VKAEEKNKDDKTKAGNGESVEPSRERDAIKESKSKEKGDRSAVAGCRKSPVPRSDVADTE
RDHKRRKLDSHSSPSHSSSVKDNNNDPKESASKHHLNYNSVARSKSRERELEKNELENAV
GRSKEKKEEKERKERKRDVGVGEREVSLEPKRRKDENGTNSSKNSQCESPCDSPLSVEKE
KSKRSKSSSKEKGDSAKPERTSTGGKKESRHDKDKSEKKEKRDSSGGKEEKKHHKSSDKH
R
NT seq 4686 nt   +upstreamnt  +downstreamnt
atggcgacacttatcctccctggtgaatgggtgaagaattgggagaaatcgggaaaacac
gaattcgtacaactctgcaaaagactaacagagaaaatagatcatggatgtcagataaaa
gatgtccaggcggccttatatgagctctgctggcaaggtgtacagggcaacctcaagttg
gacctcgtcgccagcgtcctcggcgagatgatggaactgcgcgatgacatgccatcgatt
ttagctgatgtctttagtgtgctagatttagagaccgttgcactggaagaaaaacacaaa
cgtgaccattacatccagttagtgggcgcatgtttgatttttgttccagatgccatctta
aaagagcgtctggatccagaaacacttgaatctcttggacttataaaacaagcccatcaa
tttaatcaaaagatcgtcaagatcaagacaaaactattttacaagcaacagaagttcaac
ttgttaagggaggaaaacgagggctacgccaaactaatcacagagcttggccaagacctg
tctggcaacatcaccagccacattgtattggaaagcatcaagtctctcatcggatgtttc
aatttagatcctaaccgtgttttggacatcatcctggaggtgtatgagagccgatcagac
caagatgacttcttcctgtccctcatcaagtcctacatgtgcgaggcactgactctctgc
cacatccttggctttaagttcaaattttatcaggaaccaaatgaggaaacccctaagtca
ctataccacattgctgctgctctacttcatcataacctgatagaattggaagatctctat
gtacatcttttgccactagattccgccattgtggaggaacacaaactcgttatttcagag
gccaagcagattgctcgcaagctggtcatggttgtagtgccttcggacaaaagtgaagac
aaggaaaaagagaaagaaaaggaggaagagaagattgcgcagccacctgataaccagaag
cttggtttgctggaagcacttctcgggattggagactggcaccatgcacagagcataatg
gaccagatgccttccttctatgctacttctcataagttcattgcactggcactctgtcag
ctgttgcatctgactgtggagcctctttaccgaacggctggcctcccaaaaggcgcacgg
ggatgtgtgatgcatccactgaagaataagcgggcccctaagcctgcagagagctttgaa
gacttgcgcagggaaacattcagcatgctcggctacctgggtcctcatctcgcgcatgac
cccatcctcttcgccaagatcgtgcgccttggcaaggcattcatgaaagagtaccagtgc
agtgagggcttggatataaaagataaaatggaaacactattgagttgtttcctgagcatt
gcagaccaagtgttactcccatccctctcgctgatggagtgtaatgcgtgtatgtctgag
gagctgtggggtttctttaagctttttccctaccatcacaggtaccgcctgtatggacaa
tggaaaaatgaaacgtattccagccaccccctgctggtaaaagtcaaagctcagactgtg
gaaggggctagatacattatgaagcgcttgaccaaagagaatgtgaaacaatctggaagg
cagatcggcaaactaagccacagcaaccccaccatcctttttgattatatgctgtcacag
atccagtggtacgataacctcattggtccagttgtggattccctgaaatacctcacatcc
ctcaactacgatgtcttggcctattgcattatcgaagctctggccaatcctgagaaggag
aagatgaagcatgacgacaccacaatctcatcatggctacaaagcctggcaagtttgtgt
ggagctgtgttcaggaaatatccaattgaattggctggtcttcttcagtatgtcaccaat
cagctaaaagcagggaaaagttttgacctgctgatcctgaaggaagtggtgcagaaaatg
gctggcatagaagtcacagatgaaatgacatcagagcagcttgaagcaatgacaggaggg
gaacaactcaaagctgagggtggctactttggtcagattaggaacactaaaaagtcatcc
caacgtcttaaggatgtgctacttgatcatgaactggccctgccgctttgcgtactcatg
gtacagcaaagaaatggtgtggtgttcctagaaagtggagacaaagatctcaaactggtc
ggccacttgtatgaccagtgtcatgacacactggtgcagtttggtggcttcctggcctcc
aacctcagcacagaggactacatcaagcgtgttcccgccattgacgtcctttgtaaccag
ttccatacgccacacgatgctgcgttcttcctttctcggccaatgtacgcccatcaaata
tcgtcaaaatatgacgagctgaagaaagcagagaaaggcaaccggcagcagcagaaggtg
cagaagtacgtggcagcctgcgaacaagtaatgacaccagtgcacgaggcagtgatgtcc
ctccatccagcccgcgtttgggaagacctccgcccccagttctatgccaccttctggtct
cttaccatgtatgacctggcggtgccccatgcggcctatgagcgtgaggtcaacaagctc
aaggcccagatcaaagctattgacgagaatcctgaaatccctatgaataagaaaaagaaa
gagaaggaacgctgcaccgctctgcaggaaaaactgcaggaggaggagaaaaagcaacag
gagcacgttcaaagggtgctccatcgcctcaaactggagaaagacaaatggttgatgacc
aaatctaccaagaatgagaccataacgaagttcctgcagctgtgtctgttccctcgctgc
atcttctcttccatcgacgcggtttactgtgcccgttttgtcgagctagttcaccaacag
atgacgcccaacttctgcactctgctgtgctacgacagggtgttctcagcaatcatttac
actgtggccagttgtacggaaaatgagtctcaccgatatgggcgcttcctctgctgcatg
ctcgagacggtgacccgctggcacagcgatcgtgccgtctatgagaaggagtgtggaaat
taccccggcttcctgactattttgcgagcctcaggcttcgatggaggccaacaagccaat
ccactcgattatgagaacttcaggcatgtggtgcacaaatggcattacatgttgacaaaa
gcttcagtacactgcctggaaactggagattacacccacattcgaaacatccttattgtt
ctcatcaaaatcctgccatgttaccccaaggttttgaatctgggccaagcgctggagtac
cgtgtccacaagatctgcgttaaggagaaggagaagaggccagacctctatgccttagcg
atgggctattcaggtcgattgaaaagccagaaggtgcgcatggttcctgagaatgagttt
caccataaagagccaccagctcgcaatgtcactcctgccagtcagcagaatggacccggc
accacgggcaagcctgccacagccatgatgaagggagaggatgggttctcagaagatggt
gaccgggggaaggataaatctcagactaccaaaccagtaaacaaagccaacactgcagca
gctaaagtgaccaccagcaatgggaatggtgctcttaacagcatcaaaaccataaaagag
cgggacgacaaagagaagagtggcaaggacaaaaaagagaaaaaggaaaagacaccaggc
accactcctgaaacaaaggcagaagcccgccgagaaaagctgagagaggagagagcagga
aaagatgagcgggcggttcgtgagggtaaggagaagacacccaaggcagaccgagacaaa
gtcaaggctgaggagaagaacaaagatgacaagaccaaagcgggcaacggggagtccgtg
gagccttccagagagcgcgatgccatcaaggagtcgaagagcaaggagaaaggagacagg
agcgcagtggccggctgccgcaagtccccagttcccagatcagacgtagctgatactgag
agggatcacaaaagacgaaagctcgacagtcactcttctccatcccactcctcgtctgtt
aaggacaataacaacgatcccaaggagtccgcatccaagcaccacctcaactacaattca
gtagcacggtccaaaagcagagagagggagctggagaagaacgaacttgagaatgcggtt
ggccgaagcaaagagaagaaagaagaaaaggagcgcaaagagaggaagagagacgtcggt
gtcggtgagcgtgaggtcagcctcgaacccaaacgcagaaaggacgagaacggaaccaac
tcctccaaaaacagccagtgcgagagtccttgcgactctccgctctcggtggagaaagag
aagagcaagagatccaaatcttctagcaaagagaagggcgactccgccaaacccgagcga
acgtctaccggaggaaaaaaggaatcccgacacgataaagacaagtctgaaaagaaagag
aagcgggacagcagcggaggaaaggaggagaaaaaacaccataagtcctctgacaagcac
agatga

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