Phycodurus eques (leafy seadragon): 133415867
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Entry
133415867 CDS
T09682
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133415867 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133415867 (nup98)
03036 Chromosome and associated proteins [BR:
pee03036
]
133415867 (nup98)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133415867 (nup98)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133415867 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
DUF7487
Motif
Other DBs
NCBI-GeneID:
133415867
NCBI-ProteinID:
XP_061558364
LinkDB
All DBs
Position
17:21452947..21486425
Genome browser
AA seq
1810 aa
AA seq
DB search
MFNKSFGTPFGGGSGGFGTSSTFGQQNAGFGTTGGFGTSAFGATTNTGGLFGTTQNKPGG
LFGTSTFSQPATSSTSTSFGFGAPSATSSSLFGNTAAGNPAAGGLFSQQNNAFSANKPTT
FGSFGTSTTSGGLFGSANTTSNPFGGATSLFGGSGFSATQQPGTTVKFNAPTGNDTMVKA
GVTTNINTKHQCITAMKEYENKSLEELRLEDYQAGRKGATNQMPAATGGLFGAAAPTSSA
PAGLFGSAASNNNFSFGQNKSTFGQASTGGFSGTAGGLFSQPNQQQAGSLFKPFGQATTA
QSSGFSFGNTNTMGQASTSTMGLFGNTAASQSGSLFGTAQTSTATGFGAASGLFGQAGAG
FGNVGTQPSIFGNKASGFGTTTTSAPSFGTGAGLFGNKPTLTLGTGANTSTFAGFGANPA
GGNLFGNKTTAGGLGTGLGTTFGAVVGAGTTSLFGNNQNKLGSTLGTMGTFGATGFNSGT
GAIGFGAPQQPVALTDPNAAAAQQAMLQQQFSVLAYSPYGDSPLFRNPLSDPKKKEERLK
PTNPTAQKALTMPTHYKLTPRPATRVRPKALTSSGGSKSQLFDGLDDDEPSLTNGAFVPR
KSIKKLVLKNLNSSQYSSPANKDADDLASPLAYPQNGHSQTEDDEPRAVPADDAEVTHFY
VNPIAKPVPQGRAQASLQDTICELNMHKAARNGLELSSEDASASLGEESLQEERDDVLHD
SNQLPHPAGIVLRRVGYYTIPSMDELADMVDDGGECVVENFTIGRKGYGSIFFPGTVNVT
GLDLDQIVHFRRKEVIVYPDDKNKPADGEGLNRRAEVTLDGVWPNDKTSCTQIRSPERLT
DMNYEGRLEKAARKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEDVPLKTDPKKLK
TMMSIPASRPPQAQVATTLQNGQLAAFFPSHQTTAVVELAGGVAELDSDMADVTQSFPLE
SALGDEDDCGGELAEVSEDAAGAEQDFVSPSGRVASSLGINPHALQIMKASLFAEDEDES
DFFQDHVKISSDLSSPRLLLPGRPSVGGLLQTRFSSGLPSQLPDSPRRPALPLSQVETAR
SAHWAAPPPPSFLLPPKPAEPPVRTVGIRRLGGPVPLEESITRGKENLLMDASLNAGRSF
RVGWGPGWMLAHCGNLLSSPPDKELCNQQVATNTDFGFLPKPARNKPLAESPYKVVLEQL
VGLEPPGEMMSEEESQEVLQRPLEICLKHSTVITDASACPLVRPQPGVAALQDYADWVTE
LSDKRAHADPLLAYWCEVWTLCEALWGRQPHAEALDDYERQLERRRGFSAWLSRRTAHRV
EEEVALAGKGRHTEAVFSYLTGNRISEACRLAQKEGDHRLALLLSQAAGSQYNRELLALQ
LADWNRTQTDAYLTEERLRIFTLLAGKPVWQTSDSVVNVCSQLDWKRCVAVHLWFTLPPT
ASVADALAEYQDAFRGSCEGGKYACAPLPPYLEEERSDVDEDDEEEESKRPLYDVCFHLL
KLYSDRHYGLQQLLEPLSGTRDRLDFRLSWHLWGVLQALRFGHLSAARQGLLHASYAAQL
ESAGLWHLAVFILLHIPDHAQRERAVRAVLALHCPLRDTDESLRRERFLTRRLLVPEPWI
HEAKSARARHCGDKHREALHLYRAGHWSQCHRLLVTHLAPDCIINDNHDYLLEFLEGLAV
PEHSVTIQDWDSVGKVYLDYIRLAKTLRDVQQTESGGDYELEHLHAQVTSLCGRIQLLPC
GGARDHLARSEMAKCVANFLRAVLSLQHGAGAAPCQLAPHITRLPMPEDYALEELRGLTA
SYLRQLTVGQ
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgttcgggacccccttcggcggaggctcggggggctttggcacctcg
tccaccttcgggcagcaaaacgcgggctttgggaccacgggggggttcggtacgtctgcg
ttcggggcgaccaccaacaccggagggctctttggcaccacacagaataaacccggcggc
ttgttcggaaccagcaccttcagccagccggcgacatcctccaccagcaccagttttggc
ttcggggcccccagcgccacgtcctccagcctgtttggcaacacggcggcagggaacccg
gcagccggcgggctcttctcccaacagaacaatgcttttagcgccaacaagcccacaacc
ttcggaagcttcgggaccagcaccaccagcggcggcctcttcgggtccgccaacaccacc
tccaacccttttgggggggccacgtccttgtttggcggctcgggcttctctgccacgcag
cagcccggaacaactgtcaaatttaatgctccaacaggaaatgacaccatggtgaaagcc
ggcgtgaccactaacatcaacaccaagcatcagtgcatcaccgccatgaaggagtacgag
aacaaatccctggaggagttgaggctggaggactaccaggcgggacggaagggcgccacc
aaccaaatgcccgccgcgacgggcggcttgtttggcgccgccgcccccacgtccagcgca
ccggccggcctgttcggctctgcggcgtccaacaacaacttctcgtttggccagaataag
agcacctttggtcaagcctcgacggggggcttcagcggcaccgcggggggcctgttcagc
caacccaaccagcagcaagccggcagcctcttcaagccgttcggtcaggccaccaccgct
cagagcagcggcttttccttcgggaacaccaacaccatgggccaagccagtaccagcacc
atgggtctgtttggcaacacggcagcgtctcagtcgggcagcttatttggcaccgctcag
acgagcaccgccacaggcttcggtgccgccagcgggctcttcggccaagccggcgccggc
ttcgggaacgtgggcactcagccgagcatatttggaaacaaagcgagcggctttggcacc
accactaccagtgccccgtccttcggcactggcgccggactctttggcaacaagcctacg
ctaacgctgggaactggagccaacacttcaacatttgccggctttggtgcaaaccctgct
ggagggaatctgtttggcaacaagacgaccgctggagggcttggaaccggactgggaacc
acctttggagcagtagtgggcgccgggacgacgtcactgtttgggaataaccagaacaaa
ttgggctccacgctgggaacgatgggaacgtttggggcaaccggcttcaacagcggcacc
ggcgcgataggcttcggagcgcctcagcaacctgtcgcactcaccgatccgaacgcggcc
gcagcccagcaggccatgctgcagcagcagttcagcgtgctggcgtactcgccctacggg
gactcgccactcttcagaaaccctctgtctgaccccaagaagaaggaggagcgtctgaaa
ccaaccaatccgacagcccagaaagctctgaccatgcccacacactacaagctgaccccc
cgaccggcgaccagggtccgccccaaagcgctgacctcatcgggcggctccaagtcgcag
cttttcgacggcctggatgacgatgagccttcgctcaccaacggagccttcgttccgagg
aagagcatcaagaaacttgtgctgaagaacttgaacagcagccagtacagcagtcccgca
aacaaagacgcagacgatctggcctcgccgttggcgtaccctcagaacggacacagccaa
acggaggacgacgagccgagggcggtgccggctgacgacgcagaggtcacgcacttctac
gtcaaccccatcgccaaacccgtaccgcaaggccgcgcccaggccagcctgcaggacacc
atctgcgagctcaacatgcacaaggctgccaggaacggcctggagttgagcagcgaggac
gcatcggcatctctgggcgaggagtccctgcaggaggagagagacgacgttctacacgac
tccaaccagcttcctcaccccgcaggcatcgtgctcaggcgtgtgggttactacaccatc
ccttccatggacgagctggccgacatggtggacgacggcggcgagtgcgtggtcgaaaac
ttcaccatcggcaggaaaggttacggctccatcttctttcccggaacggtgaacgtgact
ggactggacctggaccagatcgttcacttcagacgcaaagaagtcatcgtctacccagat
gataagaacaaaccggccgatggcgaggggctcaacaggcgggccgaggtgacgctggac
ggggtttggcccaatgataagacgagctgtacgcaaatccgaagccccgagcgcctcacc
gacatgaactacgaaggccggctggagaaggcggcgcgaaaacagggagcgcgcttcctg
gagtacagaccagagaccggctcctgggtcttcgaggtggctcatttctcaaagtacggc
ctgcaggactctgacgaagatgaggacgttccgctcaagaccgaccccaagaagctcaag
acgatgatgtcaattcctgcctccaggccgccgcaggctcaggtagcgacgacgctacag
aacggccaactggctgcgttcttcccatctcatcagacgacagcggtcgtggagctggcc
ggcggcgtggcggagttggacagcgacatggccgacgtcacccagagctttccgctcgag
agcgcgctgggagacgaggacgactgcggaggagagcttgcggaggtttcggaggacgcc
gcgggtgctgagcaagacttcgtctcaccatcgggccgtgtggcgtcctccctgggcatc
aacccgcatgccctacaaatcatgaaggcgtctctatttgctgaggacgaggacgagagc
gacttcttccaggatcacgtgaagatctcttcggacttgtcctctccgcgcctcctcctg
ccaggacggccctcggtgggcggtctccttcagactcgcttttcctcaggcctgccctcc
cagctccccgattcgcctcgcaggcccgctcttcctctgtcccaggtcgaaactgcccgc
tcggcacactgggcggcgccccctccgccctccttcttgctgccccctaagcctgccgag
cccccagtgaggacagtcgggatccggcggttaggaggccccgttcccctggaagagtcg
atcacgcgaggaaaggaaaacttgctgatggatgccagcctgaacgcggggcgctcgttc
cgggtgggctggggtcctggttggatgctggcgcactgtggcaatttgctgagctctcca
ccggacaaggaactttgcaaccagcaagttgcaaccaacacggacttcggtttcctgcca
aaacctgccaggaacaaaccgctggcagaaagcccctacaaggtggttttggagcaactg
gtgggtctggagcccccgggagagatgatgagtgaggaggagagccaagaggtgctgcag
cgccccctggagatctgtttgaagcacagcaccgtcatcacggacgcttccgcctgccct
ctagtccgcccgcaacccggtgtggcggcactgcaggactacgccgattgggtcacagag
ttgagcgacaagcgggcacacgccgacccgctgctggcctactggtgcgaggtgtggacg
ctgtgcgaggccctctggggtcggcagccgcacgccgaggccctggacgactacgagcgg
cagctggagaggcggcgcggcttctccgcctggctgtcgcgccgcactgcccaccgggtg
gaggaggaagtggcgctggccgggaaaggtcgccacacggaggccgtcttcagctacctg
acgggaaaccgcatcagtgaggcgtgtcgtctggcgcagaaggagggagaccaccgcttg
gccttgctgctgtcgcaggccgccggctcgcagtacaaccgcgagctgctggccctgcag
ctcgccgactggaaccgcacgcagaccgacgcctacctgacggaagaacgcctgcggatc
ttcactctgctcgccggaaagcccgtgtggcagacgtccgactcggtggtgaacgtgtgc
tcgcagctggactggaagcgctgcgtggcggttcacctctggttcacgttgccgcccacc
gcctccgtggccgacgccctcgccgagtaccaggacgccttccggggctcgtgcgagggg
ggcaaatatgcctgcgcccccctgccgccgtacctggaggaggagcggtcagatgtggac
gaagacgacgaagaggaggagtcgaagcgacctctgtacgacgtctgcttccacctgctc
aaactctacagtgacagacactacggcctgcagcagctgctggaacctctgagcggcacc
cgggaccggctggacttccgcctgagctggcacctttggggcgtcctgcaggcgctgcgc
ttcggccacctgagtgcggcgcgccagggcctgctgcacgctagctacgccgcgcagctg
gagagcgccggcctgtggcacctggccgtcttcatcctgctgcacatccccgaccacgcc
cagcgggagcgagcggtgagggccgtgctggccctgcactgccccctgcgggacacggac
gagtctctgcgcagggagcgctttctgacccgccggctgctcgtccccgagccgtggatc
cacgaagccaagagcgctcgcgcccgccactgcggcgacaagcaccgggaggcgctgcac
ctctaccgcgccggccactggagccagtgccaccggctgctcgtcacgcacctggccccg
gattgcatcatcaacgacaaccacgactacctcctggagttcctggagggcctggcggtg
cccgagcacagcgtcaccatccaggattgggacagcgtgggcaaggtgtacctggactac
atccggctcgccaagaccctgcgggacgttcagcagacggagagcggcggcgactacgag
ctggagcatcttcacgcccaagtgacgtctttgtgcggcaggatccagctgctgccctgc
gggggcgccagagaccacttggcccggtcagagatggccaagtgcgtggccaacttcctg
cgcgcggtgctgagtttgcagcacggtgcgggcgctgcgccgtgccagctggcgccgcac
atcacgcggctgcccatgcccgaagactacgccctagaggagctgagaggcctcaccgcg
tcgtacctgcgccagctcaccgtcggccaatga
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