Phycodurus eques (leafy seadragon): 133416228
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Entry
133416228 CDS
T09682
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133416228 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133416228 (ddx46)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133416228 (ddx46)
Spliceosome [BR:
pee03041
]
Complex A
U2 snRNP components
U2 related factors
133416228 (ddx46)
Complex B
133416228 (ddx46)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
133416228
NCBI-ProteinID:
XP_061558979
LinkDB
All DBs
Position
17:complement(17762675..17775119)
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AA seq
1066 aa
AA seq
DB search
MGRESRHYRKRSASPRRSGSRSRSRSTDKRSKKDDRDRSRRERSRSRDRRRTRSRSRDRK
RARRSRSRERRRSRSRERKRSGSRGRARRSRSASPSKSRKTDEKSKSKEKENLDVVPDKK
KIKEEKEEEKVEDQQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQ
GKKWSLEDDDDDDEDTPVPMEADEDDDDEDGEAKGEAMEGEAEEEKMEESEKDTNVPAEK
KDDEDDVDPLDAYMEEVKQEVKKFNMGGVKGNDKKGATVTKVVTVVKTKKGPHTHKKKGE
LMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHGKIEYEPYRKNFYVEVPDLA
RMSNEEVNTYRTELEGITVKGKGCPKPIKTWVQCGVSMKILNALKKQSYEKPTPIQAQAI
PAIMTGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITK
ECKKFSKSLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRA
TYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILVKPLEIQV
GGRSVVCSDVEQHVLVIEEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADALLKDLMKAS
YPCMSLHGGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDY
VHRAGRTGRAGNKGYAYTFITEDQVRYAGDIIKALELSGSPVPADLEQLWASFKDQQKAE
GKTIKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNS
KKRVKDLTAPGAAAGAAGSTGASTGSLSGLPGMGPTSAGNIQKLEMAKRLALKINAQKNL
GAEAQDVMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPMEKLEEERQAAEQ
SETVKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERK
IYLAIESANELAVTKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgagagtcgcgacattacaggaagcgctcggcttcgcctcggcggtccggtagc
cgctcgaggagtcgctctacggacaaacgctccaagaaggacgaccgggaccgaagccgg
agggagcggtctcgaagccgggataggcgcaggacccggtctcgctcacgagacagaaag
cgtgccaggcgctccaggagcagggagaggaggaggtccagaagccgcgaaaggaagcgt
tcgggcagcaggggccgagccaggaggtcccgctcagccagccccagcaagagcaggaaa
actgatgaaaagtcgaaaagcaaagagaaagaaaaccttgatgttgtacctgacaagaag
aagattaaggaggagaaggaagaggagaaagttgaagatcagcaagattttgaccagaac
aagctggaggaggagatgaggaagcggaaggagcgtgtggagaagtggcgcgaggagcag
cgcaagaaggccatcgagaacatcggcgagatcaagaaggagctggaggagatgaagcag
ggcaagaagtggagcctggaggacgacgacgacgacgacgaggacacgcccgtcccgatg
gaggcggacgaagacgacgacgacgaggacggcgaagccaaaggggaggccatggagggc
gaggccgaagaggagaagatggaagagagtgagaaggacacaaatgtgcccgcggagaaa
aaggacgacgaggatgatgtcgacccgctggacgcctacatggaggaggtgaagcaggag
gtgaagaagttcaacatgggaggcgtgaaaggaaatgacaagaagggcgcaacggtaacc
aaagtcgtgacagtggttaaaaccaaaaaaggacctcacactcacaagaagaagggtgag
ctgatggagaacgaccaggatgcaatggagtattcgtcggaggaggaggaagtggacctg
cagacggcgctgacaggcttccagaccaagcagaggaaggtcctagagcccgtcgaccac
ggcaagatcgagtacgagccctaccgcaagaacttctacgtggaggtgcctgatctggcc
aggatgtccaatgaggaggtgaacacttaccggacggaactggagggaattacggtgaag
gggaaaggctgtcccaagcccatcaagacttgggtgcagtgcggcgtgtccatgaagatc
ctgaatgccctcaagaagcagagctacgagaagcccacccccatccaggcccaggccatc
cccgccatcatgacgggccgagacctcatcggcatcgccaagacgggcagtggcaaaacc
atcgccttcctcctgcccatgttcagacacatcatggaccagaggccactggaggagtcc
gaggggcccatctccgtgatcatgacgcccaccagagagctggccctgcagatcaccaaa
gagtgcaagaagttctccaaatcgctaggactcagggtggtgtgcgtgtacggaggaacg
ggtatcagtgaacagattgccgagctcaagcgaggtgcggagatcatcgtgtgcacgccg
ggaagaatgatcgacatgttgggtgccaacagcggtcgcgtcaccaacctccgtagagct
acgtacgtggtgctggacgaggcggacaggatgttcgacatgggcttcgagccgcaggtc
atgcgcattgtggacaacgttcgtccagaccggcagacggtgatgttctccgccaccttc
cccagagccatggaggcactggctcggaggatcctggtcaagcccctggagatccaggtg
ggcggacgcagtgtggtctgctctgacgtggagcagcatgtgctggtgattgaggaggac
aagaagttcctgaagctgctcgagatacttggccactatcaggagaagggctcagttatc
atcttcgtggacaagcaggagcacgccgacgctctcctcaaagaccttatgaaggcctca
tacccctgcatgtcccttcacggaggtattgaccagtacgaccgagacagcatcatcaac
gacttcaagaacggcgcctgccgcctgatggtggccacgtcggtggcggcgcgaggcctg
gacgtcaagcagctcatcctggtggtcaactacaactgccccaaccattacgaggactac
gtgcacagggccgggcgcacgggccgagcgggcaacaagggatacgcctacacctttatc
accgaggaccaggtccgatacgccggcgacatcatcaaagccctggagctgtccggttct
cccgttccggccgacttggaacagctttgggcctccttcaaggaccagcagaaagcggag
gggaagaccatcaagagcagcagcggcttctcgggcaaaggcttcaagttcgacgagacc
gagcacgcgctggccaacgagaggaagaagctgcagaaggcggcgctcggcctgcaggat
tccgacgacgaggacggagccctggatattgaggagcagatcgaaagcatgttcaactcc
aagaagcgcgtcaaggatctgacggctcccggagcggcggcgggcgcagccggctcaacg
ggcgcttccacgggctcgctgagcgggctcccgggtatgggacctacgtctgccggaaac
atccagaagctggagatggccaagcgactggctctcaagattaatgcccagaaaaatctg
ggagctgaagctcaggacgtgatgcagcaggcaaccaacgccatcctgcgcggcggcacc
atcatgacgccgtctgtgtcggccaagaccatcgccgagcagctggccgagaagatcaac
gccaagctcaactacacaccgatggagaagctggaggaggagcggcaggcggccgagcag
tccgagaccgtcaagcggtacgaggaggagctggagatcaacgacttcccgcagacggcc
aggtggaaggtgacgtccaaggaagccctgcagaggatcggcgagtactctgaggccgcc
atcaccatcagaggaacctacttccctccgggcaaggagcccaaggaaggggagcgcaag
atctacttagccattgaaagtgcaaatgagctggctgtgaccaaagccaaaacagagatt
acacgtcttatcaaggaagaactcatcagattacaaaactcctaccagccgaccagcaaa
ggacgatacaaagtgttgtaa
DBGET
integrated database retrieval system
