Phycodurus eques (leafy seadragon): 133416331
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Entry
133416331 CDS
T09682
Symbol
pcdh1a
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
133416331 (pcdh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pee01009
]
133416331 (pcdh1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pee04515
]
133416331 (pcdh1a)
Protein phosphatases and associated proteins [BR:
pee01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133416331 (pcdh1a)
Cell adhesion molecules [BR:
pee04515
]
Cadherins
Protocadherins
133416331 (pcdh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
He_PIG
Motif
Other DBs
NCBI-GeneID:
133416331
NCBI-ProteinID:
XP_061559160
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Position
17:complement(19001965..19082003)
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AA seq
1189 aa
AA seq
DB search
MERNLLVMLFWLPVLLCSFAEGSIMYRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRLLVRGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSERNGVNDYALTAGQDAETL
FGLQVADDRGGKLPQLIVLGNLDREIKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
SPKFEKLTYEAEVSENSPVGHSVLQVKANDSDMGPNGEIEYTLHQAGDAVPKLLRIDRST
GIIYVKGPLDREEIDSLSFYVVARDKGPQPKSSKTFVTIEVNDQNDNAPAVEIRGIGLVT
HSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPISDSSSDNKRKY
FLQTTTLLDYERVKDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTLFEVDFA
EENQPGEKVLDVIASDADSGTNADLLYHIVADTSIKGLFEIDPKTGEVKARNPLDREHKE
HYEFRVTAADKGSPVHKGTASVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV
MDVDKGENAHVQLSVESDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGQPPRS
SYVGVTINVLDENDNDPVVTKPSNSSFRLLSPLASPDSHVEMVEAEDLDSGLNAELVFSI
AGGNPYQLFRISPSSGEITLAKEMAPKYGGLHRLVVKVTDRGKPARHATALVHIYVNETI
SNVSLVEALIGHSLYTPLDRDIAGDPDNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQPGKKETKDLYAPKQAPKNVKGKRGRKGKPQKSPKPLGEEEEVSLQKSLK
FNLDAVNDSPRIHLPLTYSPESPDIGRHYRSNSPLPSIQLQAQSPSGSQKHQAVQDLPAT
NTFVGTGGDDNSTGSDQYSDYSYKTSQPKYNKQHPHRRVTFSTTNPVQDLQDASQHSYYD
SGLEESETPSSKSSSGPRIGPLNLPEDHYERTTPDGSIGESEHPENDIRSLPDVAMTGNC
TTECSELGHSDACWMPGHPSPVRRTRNPPKLSTFVPYQERGSLGRLANGSAILGGEEHRS
RLAPSRSAYSSSGHDASQDCPLEEMPLSVTSEFPPTSPSTHTPKREIYL
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggaacggaatttactagtgatgctattttggctcccggtgctgctctgcagcttcgct
gaaggcagcattatgtatcgggtccaagaagagcaacctcccaacactcttattggtagt
ctggctgcagaccacgggctgccagactcaggtcatctctacaagctggaggtgggtgcc
ccttatctacgtgttgatggaaagaccggagatattttcaccactgagatccccatcgac
agagagacactgagagactgccggttgcttgttaggggtaagccctgctacctggaattt
gaagtatccgtaacagatctgatacagaaccagagccctcgactcattgaaggacgcatt
gaggtacaggacatcaatgacaacaccccccagttcccgtcttctgtgctcactatatcg
gtccctgagaacacgatcatgggggcactgttctccataccgttagcaactgacagagac
tcagaaaggaatggggtgaatgattatgccctgacagcaggacaagatgcagaaacactg
tttggtttacaagtggcagatgacaggggtggcaagctcccacagcttattgttctgggc
aacttagatcgtgagataaaggattcctatgaccttaccataaaggctgtggatggagga
aacccacagcgctacagcagtgctttgctgcgagtggtcgtcactgatgccaatgacaat
tcacccaagtttgaaaaattgacatatgaagcagaagtatcggagaacagtccagtgggg
cattcagtgctgcaggttaaagcaaatgactctgacatgggccctaatggagaaattgag
tacacacttcatcaagcaggagacgcagtgccaaaactcttacgaatagatcggtccact
ggtatcatctatgtcaaaggaccactggaccgagaggagattgacagcctgtccttctac
gtggtagcaagggataagggtccacaaccgaagagctcaaagacctttgttaccattgag
gtgaatgaccaaaatgacaatgctccagctgtggagattcgtggcattggtcttgtgact
cacagtgacggagtagctaacatttcagaagatatgccggtgggaaccgctgttgctttg
gtgcaagtgtctgacaaggacgagggagagaatgctgtggtcacatgtgtggttgcgggg
gatgtgcccttccagctccgccctatcagtgactcatccagtgacaacaagaggaaatat
ttcctacaaacaaccactctcctcgactatgaaagggtgaaggattatcgagtggagatt
gtggctgtagattctgggaatcctgcgctctctagtactaactcattgaaagtacaggta
actgatgtaaatgataactctccagtattctccccaaccttgtttgaggtagattttgca
gaagaaaatcaacctggagaaaaggttttggatgttatagcttcagatgcggacagcggc
acaaacgcagaccttctctatcacattgtagcagacacatccatcaagggtctgtttgag
attgatccaaaaacaggggaagtcaaagctcggaacccacttgatcgtgagcacaaagaa
cactatgagttccgggtcactgcagctgacaaagggtcacctgtccataaaggaacagca
agtgttgtaataaaagttcttgaccgcaatgacaatgaccccaaatttatgctgagtggc
tacagcttctcagttttagaaaacatgcctcccctgagccctgttggcatggtaacagtc
atggatgttgataaaggtgaaaatgctcatgttcaactctctgtagagtctgatggaggg
aaatttgttgttcaaaatggaactgggaccattctctcaagcatttcatttgacagggag
aaagagagcagctacactttccgtctaaaagcagtggatggggggcaaccaccccggtct
tcttatgtgggtgttaccatcaatgtactggatgaaaatgacaatgatccagttgttaca
aaaccctccaattcttccttcagacttttgtcaccccttgcttcccctgatagtcatgtg
gaaatggtggaagctgaagaccttgacagtgggctcaacgcagagctggtcttcagcatt
gcaggtggtaacccttaccagttatttcgcatttcgccgtccagtggagagattacgcta
gcaaaggagatggccccaaaatatggcggactccatcgcctggtggtaaaagtgactgac
agagggaagcctgcacgtcatgccactgccttggtccatatctatgttaatgaaaccatt
tcaaacgtcagcttagtggaggctctaattggacacagtctctacactccactagacagg
gatattgctggtgatcctgacaatggctttgctgcacaacggagcaacattttgtttgga
agccttgctggggtggcaggtgttgttatgcttatcttggtggtggtttttattcgacac
cgcatccaaagagaaacaaagagtggatatcaaccgggcaagaaggaaacaaaggacttg
tacgcacctaaacaggcaccaaaaaatgtcaaagggaaacgaggtaggaaaggaaaacct
cagaaatccccaaaaccacttggggaagaagaggaggtcagcctccaaaaaagcctcaaa
ttcaaccttgacgcagtcaatgatagcccaaggatacatctgcccctgacttactcacca
gaaagccctgatataggtcggcactatcgctccaactccccgctgccctccattcagctc
caggcccagtctccctcgggctcacaaaaacatcaggcagtccaagaccttccggctact
aatacctttgtaggcactggaggagatgacaactctactgggtcagaccagtactctgat
tacagctacaagaccagtcaacccaagtacaacaaacagcatccccatcggcgagtgacc
ttctccaccaccaaccctgtgcaggacctgcaggatgcctctcagcacagttactatgac
agcggcttggaagaatcagagacacccagcagcaagtcatcgtctggccctcgcatcgga
cccttgaacctgcctgaagaccactatgagcgaaccactccagatggcagcattggagaa
agcgagcaccctgaaaacgacattcgctcgcttcctgatgtggcaatgaccggaaactgt
acaactgagtgcagcgaattgggccactcagatgcgtgctggatgcccgggcatccctct
cctgtacgcaggacgaggaaccccccgaaactctccacttttgtgccttaccaggaaaga
gggagtctgggacgcctggcaaatggcagcgccattctgggaggcgaagagcaccggtca
cgccttgcaccctctcgcagtgcctattctagcagcggtcacgatgccagtcaggactgc
cccttggaggagatgcccctcagtgtaacctctgagttcccgcccacctcgccgtctacc
cacactcctaaaagagaaatctatctgtga
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