Phycodurus eques (leafy seadragon): 133416787
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Entry
133416787 CDS
T09682
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133416787 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pee03019
]
133416787 (hbs1l)
Messenger RNA biogenesis [BR:
pee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133416787 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_16
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
133416787
NCBI-ProteinID:
XP_061559962
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Position
18:9348062..9371795
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AA seq
703 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCISPATANQFIYSRREKQVPKEETLEEEEY
EEKDAPMSPTISHNLDPLEQAKLYSCLDHMRAVLSDSMPDSVLNQAAIRCGFDAQRALDA
VLSEEPIMAHIPNTTADVPPAVQKLSEEKAPLPQRSKQAAVIEKAKSRGISQNKLDCEVV
PKVARMTVSGKKQTMGFDVPSSGDNSVIAAMAQRGSSPENSTVTSAAGEATPKRPETPSR
VSNEDELPSVPTPGRSAGRARQAIDIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLL
YLLGNVNKRTMHKYETESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETKSKVVT
LMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHGLLVRSLGVTQL
AVAVNKMDQVNWQQERFQEITSKLGHFLKQAGFKESDVFYIPTSGLSGENLSARSLVSEL
TTWYSGLSLLEQIDAFRPPQRSVDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGEKLL
AMPPNETCLVKGITLHDAPLDWAAAGDHVSLTVTGMDIIKINVGCVFCNPKEPIRVCTRF
RARLLLFNFEVPITKGFPVLLHYGTVSEPATITKLLSLLHKSTGEVLKKKPKCLGKGMNA
IVEIQTQRPVALELYKDFKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacagaaacgtccgaggctacaactacgacgaagattttgaagatgatgac
atgtatggacaatctgtagaggatgactactgtatatcaccagcaacagcaaatcagttc
atctactctcgtcgagagaaacaagtgccgaaggaagagacgcttgaagaggaggaatac
gaagaaaaggatgcacccatgtccccgaccatcagccataaccttgacccgcttgagcaa
gccaagctctactcatgcctggaccacatgagggctgtgctgagtgactcgatgccagac
tccgtgttgaaccaggcagccataagatgtggattcgatgcacagagggcgcttgatgcg
gttttgtccgaagaacccataatggcccacatccccaacaccacagctgacgttccgccg
gctgtccagaaattgagtgaggagaaagcgcctttacctcaaagaagcaagcaggcggcc
gtgattgagaaagctaaaagcagaggcatctctcaaaataaactggactgtgaagtcgta
cccaaagtggcccgtatgaccgtctctgggaagaagcagaccatgggctttgatgtcccc
agcagtggggataacagcgtcatcgctgccatggcacaacgaggcagcagccccgaaaac
tctacggtaacatccgctgccggcgaggccacccccaaacgacccgagacgccgtctaga
gtgtcgaacgaggacgagctccccagtgttcccactcccggacgctctgccggaagggcc
cggcaggcgattgacataaaggctgaactggaaaagagacaaggaggcaaacctcttttg
aatttagtggttataggtcatgtcgacgcagggaagagcacactcatgggccacctgctc
tatctgctgggcaacgtcaacaagcgcaccatgcacaagtacgaaaccgagtccaagaag
gcgggcaaggcgtcgttcgcctatgcctgggtgctggatgaaactggcgaggagcgggac
agaggcgtgacaatggatgtcggcatgaccaagtttgagacgaagtcaaaggtggtgacg
ctgatggacgcccccggacacaaagacttcatccccaacatgatcacaggagctgcccag
gcggatgtggccgtgctagtggtagatgccagccgaggagagttcgaggcaggcttcgag
gctggtggccagaccagggagcacggcctgttggtgcgctcgctcggtgtcactcagctg
gcagtggcggtcaacaagatggaccaggttaattggcaacaggaacgcttccaggaaatc
acgtccaaactcggccactttctcaagcaggcaggcttcaaggagtcggatgttttctac
atccccaccagcggcttatcgggagagaacctcagcgccagaagtttggtttccgagctc
acaacttggtactctggtctcagcctgctggaacagattgatgccttcaggcctcctcaa
cgctctgtggacaaaccttttcgactgtgcgtgtctgacgtctttaaagaccagggctcg
ggcttctgcatcacaggcaagattgaggctggttatattcagaccggagagaaactgctg
gccatgccccccaatgagacttgtctagtcaaaggaatcactctgcacgatgcccctttg
gactgggcggcagccggagaccatgtcagcttgacggtaactggcatggacatcatcaag
atcaatgtggggtgtgtgttctgcaatcccaaagagcccatcagagtttgcacccgattc
agagcacgactattactcttcaattttgaggttcccatcacaaaaggattcccagtattg
ttgcattacggtacagtgagcgagccagccacaattactaaacttctaagtcttttgcac
aagagcaccggcgaggtcctcaagaagaaaccaaagtgtttgggcaaaggcatgaacgcc
atcgtggagattcagacgcagaggcctgtcgcgttggaactgtacaaagacttcaaggag
ctgggtcgcttcatgctgcgctatgtgggctccaccatcgctgcaggcgttgtcacagaa
atcaaagaatga
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