Phycodurus eques (leafy seadragon): 133417287
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Entry
133417287 CDS
T09682
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pee03036
]
133417287 (tdrd12)
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
133417287 (tdrd12)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Gene silencing
piRNA pathway
133417287 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
133417287
NCBI-ProteinID:
XP_061560914
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All DBs
Position
2:2129970..2172357
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AA seq
1347 aa
AA seq
DB search
MFKLLNLKLVDPTCMWAQLDGPVGVEALDKRQYDELFTRMNVFYNGVTRDMCAVTPSSLA
VGQVCVVYWSQMKMWCRARLESIASDSHAFYACCYLLDHGEPLVVLFSQIRRVELDFLQL
PFMMRRLHLARVKPLTLQVSVCEKAKLVPSSRWDSSATSYLYHLFKTSSQVEAVVLQDGS
HSTAIELYVSVNGVKICVNDELVAKRFAIYSQDVSNSSKLEQLNIQHFRFPNRGLKAPAW
KPPAQVAAAPVPVTEVETAPPPVMQPAGLRACDLMTAPSQSPEYEGGITSEVTDGQALLG
SQSESDTLEESDASLATAFKSHLTLFRFMRFLNPECSFEAETSVSQPEELTECSPPHASS
SPSTGQEVLPPGQSDVMKRTDDNWACTRLLEWLNPQSLKFHSEDAGDPVLPSTPKTGDIL
VHSDLPMETFSSLDDAPITDTFRRMLQRKQFCPSPADLLTWAAVARGNNTVVISHAGDQP
QSYLAPLLSHILLSTIFTVSSSRAGPVAVVLCPGWEKVHLLCDLLEESKVSQRLKTTSVL
IGGAKDEANNINIPKDCLLLVTTPFSLVRLLSCHCFLFLRFGHLVLDEADQLFTLAPDQM
EIILQHFQKVISRQEMSLCPQQLVAVAKRWTGQMEALIANHMPYACMVIAAPEEAALYGN
VQQVVLMTLESSKIATLLSVIDFCPDVGQKTVIICNAAEEVEDVHKAVSSKLGFCMKTHE
GLTHTFDFVHQQWAKSIRPGTHVILVITNECLRCLALTDATCVVHFGFPRSPKMFGSRLF
CMSSNFRNLSEPPSSQNTTSKGPQVCKSFLLVSERNAQHVGGLVRYLKRSHALLPAELLA
FAEAADEAQEEGKTERPLCRHLKSFGVCRFSVCPDRHRLISQLDQSNLPASGLIEVLPLY
VKTASVFFGRIIREEDGVFDRMVADMTSYYADHQLFSEEVQEGGLYAVQEDQDFHRVKVL
TVPDTKGRLFFSVLVRFIDVGKEREVKSHQILQLPEEFHSVPGQAVEMIVCQVKPGDAEA
DWHPKVTRAVSQKIQGVKHRARAVHSLGNTVFLDIMVRETRVPGMKTVISEYNVPTLILN
TGMAERNPGHLDQLKALSREGVTDRACGRNRTSDPPAEPESLQMSNCFTIGNKTVEGVKE
PELPEHKSLPLLQEADEKTNIQTSSDISGTETNPTINQPPHLNTFKDGDPAGDDQNNELL
ITCHGDMTKSLHPQVRWYQTSTSLSVTLKMRDPQRQRCDFHPDRAVYSGNVDGRRYRADL
DLYAGVLAERCRCELKSNEPVLTLVKRECGYWPTLLRSKNIFVSYDMEHLEEEEDNVSTH
SVAFVGDTGGDYHFVERDSSTDSDSTC
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaattgctgaatttgaagctggtggacccgacatgtatgtgggcgcagctggac
ggccccgtcggcgtggaggcgctcgacaagcgtcagtacgacgagcttttcacgcgcatg
aacgtcttctacaatggcgtcaccagggacatgtgcgcggtgacgccctcctcgctggcg
gtgggacaggtgtgtgtggtgtactggtcccagatgaagatgtggtgccgggcccggctg
gagtccatcgcctcagactcgcacgcgttttacgcttgttgttacctgctggaccacgga
gaacctctggttgtcctcttcagccaaatccgacgtgtcgagctggacttcctccagctc
ccgttcatgatgaggaggttacacctggcgagggtcaagcccctgacgctgcaagtgtct
gtttgcgagaaggccaagctggtgccgtccagccgctgggacagctcggccacgtcttac
ttgtaccaccttttcaaaacatcgagtcaggtggaggccgtggtactgcaggacgggtcc
cactctaccgccatcgagctctacgtgagcgtcaacggtgtcaagatttgtgtgaatgat
gagctggtggccaagaggtttgctatttacagccaagacgtgtctaatagcagcaagctg
gagcagctcaatattcagcattttaggtttccaaaccgcggcctcaaagcacctgcctgg
aagccgccagcacaggtcgcggccgctccagtgccagtaacagaagtggaaactgcaccc
cctccggtgatgcagcctgctggactgcgagcctgtgatctaatgacggcgccctctcag
agtcctgagtacgagggaggcatcacctcagaggtcacagatggacaagcgttactgggc
agccaatcagagagtgacacattagaggaatccgatgcctccctggctaccgcgttcaag
tcccacctcactctgttcaggttcatgaggttcctcaatcctgaatgcagcttcgaggcc
gagacaagtgtgagtcaacctgaggagctgacagagtgttcaccgccacatgcttccagc
tcgcccagcacaggacaggaagtgctgcctcccggccaatcggacgtgatgaagaggacc
gacgacaactgggcttgcacgagacttttggagtggctgaatccacaatctctgaagttt
cattcagaagatgcaggtgacccggtccttcccagcactcccaagactggtgacattctg
gtacactctgacctcccaatggagacgttttcaagcctggatgacgcccccatcactgac
accttccgcaggatgttgcagaggaagcagttttgcccgtctcctgcggacctcctcact
tgggccgccgtggctcgaggaaacaacacagtggtcatttcgcatgctggtgaccagcct
caaagctacctggcccccctcctcagtcacatactgctcagcaccatcttcaccgtctcc
tcatccagagcgggcccagtagcagtggtgctgtgtcccggctgggagaaggtccacctg
ctgtgcgaccttcttgaggagagcaaggtttcccagaggctcaagacaaccagtgtgctg
ataggtggtgccaaagatgaggccaacaacatcaatattcccaaagactgcctgctgtta
gtgactactcccttcagtctcgtgcgtctcctgtcatgtcactgctttctgttcctgcgt
ttcggtcaccttgtgctggatgaggccgaccagctcttcacgctggctccagaccagatg
gagataatcttgcagcattttcagaaggtcatctcccgccaggaaatgtcattgtgtccg
cagcagctggtcgctgtagccaagcgatggacgggtcaaatggaggctttgattgccaat
catatgccctacgcttgcatggtcatcgcagctcctgaagaagcagccctctatggaaac
gtgcagcaggtcgtcctcatgaccttggagagcagcaagatcgccacactgttgagtgtg
atagatttctgccctgatgtgggccagaagactgtcatcatctgcaacgccgctgaagag
gttgaagatgtccacaaagctgtgagcagtaaattgggtttctgtatgaagactcatgag
ggtttaacacacacctttgactttgtgcaccagcagtgggccaaaagtattagacccggc
acacacgtcattctggtcatcaccaatgagtgcctgagatgtttagcgctgacagatgcc
acctgtgtggtccatttcggattcccaaggtctcccaaaatgtttggaagcagactcttc
tgcatgagcagcaacttccgaaacctctcagagcctccttcctcccagaacacaacgtcg
aaaggtcctcaagtctgcaagtcctttctgctggtctctgagaggaacgcgcagcacgtt
ggtggcctggtgcgctatctcaaacgaagccacgctctgctaccagcagagctgctggcc
ttcgcggaagcggctgacgaggcccaagaggagggcaagactgagcggccgctctgtcgc
cacctgaaaagttttggagtgtgcaggttcagcgtgtgtccagaccgccacaggctcatt
tctcagctggatcagtccaatcttccggcttctggactcatagaggtgttgcctctctac
gtcaagacggcatctgtcttctttggtcgaataatccgggaggaggacggcgtgtttgac
cgcatggtggctgacatgacgtcttactatgctgaccaccagctgttttctgaggaggtg
caagaaggaggcttgtacgctgtgcaggaggaccaagacttccacagggtgaaggtcttg
actgtccccgacaccaaaggccggctatttttcagtgtccttgttcgcttcattgatgtt
ggcaaagagagagaagtcaaatcccaccagatcctgcagctaccggaagagttccactct
gtgcccggccaggctgtggagatgattgtgtgccaggtgaagcctggtgacgccgaggct
gactggcatccaaaggtgactagagccgtcagccagaagatccaaggtgtcaagcacaga
gccagagccgtgcacagtctgggaaacacagtcttcctggatattatggttcgggagact
cgggtgcctggtatgaagacggtaatcagtgagtacaacgtacccacgctcattctgaac
acgggcatggccgaacgaaacccgggtcacctggaccagctgaaggcgctcagtcgggaa
ggagtgaccgatcgtgcgtgcggcaggaatcgaaccagtgaccctccagcggaacccgag
tccttacagatgagcaattgtttcactatcggaaacaaaacagtggaaggagtcaaggaa
ccggaattaccagaacacaagtcacttcctcttctccaggaagcagacgagaagacaaac
atccaaacttcttctgatatcagcggaactgaaaccaacccaacaattaaccagcctcct
catcttaacaccttcaaagacggtgatcccgctggtgacgatcaaaacaatgagctgctc
atcacttgccatggagacatgacaaagagtctgcaccctcaggtccgctggtaccagacg
tccacatcattgagcgtcacgctgaagatgagggacccgcagcgtcagcgctgcgacttc
cacccggaccgcgcggtctacagtggaaacgtggatggtcgccgctacagagcggatctg
gatctctacgcgggcgtgttggccgagcgctgccgctgcgagttgaagtccaacgaacct
gtcctcacactggtcaaacgagagtgcggctactggcccacgcttctcaggagcaagaac
atttttgtgagttacgatatggagcacctggaggaggaggaagacaacgtgtcaactcat
agtgtcgcgtttgtgggcgacacgggaggagactaccactttgtcgaaagagacagcagc
accgacagcgactccacctgctga
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