Phycodurus eques (leafy seadragon): 133417599
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Entry
133417599 CDS
T09682
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pee04121
]
133417599 (rnf40)
Enzymes [BR:
pee01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133417599 (rnf40)
Ubiquitin system [BR:
pee04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
133417599 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
Rab11-FIP3
zf-RING_2
zf-RING_5
Laminin_II
Motif
Other DBs
NCBI-GeneID:
133417599
NCBI-ProteinID:
XP_061561424
LinkDB
All DBs
Position
19:3625647..3638872
Genome browser
AA seq
1003 aa
AA seq
DB search
MSGVGGGKRPPGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVIQFKNKK
LSERLEQRQALEDELREKIEKLEKRQATDDTTLLIVNRYWSELEEKVHVLRKRIEPEAPV
PSKPVPPPAPLPDPVPMEGDGVSMVSPTSGAPPPPLPEAHGDGKLPEHQQHGEVSKEGHR
DTPQQPPQPDRSEQLTPTEPPWQSTTETSPPPPFPLSESAKGFLATLEHSSEEELALHLQ
DRMFFSKDAIACLVCVFDRLHSCIDDMCKQIQAAACEDESLASAGAVNRTLLDENRRLRD
QATLLQGRHHKTSMEYNEWVDKVTSAETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAE
AMEQLKSGYSSTGSSGGLAGGQITLTIQKFESLNTELEHNQELANSRMAELEKLQVELQE
AVRESEKLKIDLRNIPEEVVKETVEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNA
HLRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINRE
MRHLISSLQNHNLQLKGDVQRFKRKLRETQVEINKLRCLSSDAGGLVLEESTGDTNEVKK
EEDEDQEEEEERRKELERQRAREREREAERERERERERERQRSDELKRKDSDTLKMLRVE
LKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRIRVRELEERERKES
KKLADEDALRKIRVAEETIEHLQKKLGATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQ
LREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLAFKTQVDAQLLVVQKLEEKEGVL
QGTLATLEKELSVRTQALELNKRKAVEAAQLAEDQKVQLEHTQAKLKEIQVAVAENRTAR
ERESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKDT
VLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgtagggggaggaaagcgtccccccgggggggacagtccccccggcccacct
gagaagaaaagcaaaaaggaggagaagaccaccaccactctcattgagcccattcgcatc
gctggagtctcgtccactgaggaaatggacatgaaggtgatccagtttaagaataagaag
ctgagcgagcgcttggagcagcggcaagcactggaggatgagttaagggagaaaatagag
aagctagaaaagaggcaagcaactgatgacaccaccctgctgattgtgaaccgctactgg
tcagagctggaagaaaaggtccatgtcctgcgtaaacgtattgaaccggaggccccagtg
ccgtccaaaccagttccccctcctgcgccgcttcctgatcctgtacccatggagggagac
ggtgtcagtatggtctcaccgacctccggtgcgcctccaccgccgctccctgaggcacac
ggtgacgggaaactaccagagcatcagcagcatggtgaagtatctaaagaagggcatcgg
gacactccccagcagcctccacaacctgacagatcagagcagttaactcccacagagccc
ccatggcaatcaaccacagaaacatcaccaccgcccccttttcccctgagcgagagcgcc
aaaggtttcttggccacgctggagcacagcagcgaagaagagctggcgctgcacctccag
gaccgcatgttcttcagcaaggacgccatcgcctgcctcgtgtgcgtcttcgaccgactg
cacagctgcattgacgacatgtgcaagcagatccaagctgcggcgtgcgaggacgagagc
ctggccagcgcgggcgccgtgaaccgcactctgctggacgagaatcgcagactgcgagac
caggccaccctgctgcagggtcgacatcacaaaacgtcaatggagtacaacgaatgggtg
gacaaggtgaccagcgcggagaccaaggtgtcggagatggagaccactgtggaggacttg
cagtgggacattgagaaactccgaaatagggaacaaaagctcaacaagcacttggcagag
gccatggagcagctcaagtctggctacagcagcaccggcagctcaggtgggctggctgga
ggccaaattacattaaccattcaaaagtttgaaagtcttaacacagagctggaacacaac
caggagttggccaacagccgcatggcagagttggagaagctgcaggtggagctccaagag
gccgtgagggagagcgagaagctcaagatcgacctgcgtaatattccggaggaggtcgtg
aaggagactgtggagtacaagtgtctgcagtcccagttctcgctactctacaacgagtct
ctgggagtgaaaacccagctcgatgaggctcgggccctcctgctcacggccaagaacgcc
cacctcagacagattgagcacatggagagtgacgagctgtccctccagaagaagttgcgc
actgaagtcatccagctggaggacacgctggcccaagtgcgcaaagaatatgaaatgttg
cgcatcgagtttgagcagaatctcgccgccaacgagcaagcaggaccaatcaacagggag
atgcgacacctaatcagcagccttcagaaccacaacctgcagctaaaaggtgacgtgcag
cgcttcaagaggaagctgcgcgaaacccaggtcgaaatcaacaagttacgctgcctgagc
agcgacgcgggcggtctagttctggaggagtcgaccggcgacaccaacgaggtgaagaaa
gaggaagatgaggaccaagaagaggaggaggagaggaggaaggagcttgagaggcagcgg
gcccgcgagagggagagggaggccgagcgcgaacgagagcgagagcgcgagcgcgagagg
cagcgcagcgacgagctcaagaggaaagactcggacacgttgaagatgctcagagtcgag
ctcaagaaagctcaggagtcccagaaagagatgaagctcctgctggacatgtacaaatcg
gctccaaaggagcagcgggacaaagtgcaactcatggcagctgaacgtaaatccaaagca
gaggtggatgagttgaggattcgcgtgcgggagctggaggagcgcgagaggaaggagagc
aagaagctggccgacgaagacgccctcaggaagatccgagtggccgaagagaccatcgaa
catctgcagaagaagctgggcgccactaagcaggaggaggaagcgctgctgagcgagatg
gacgtcacgggccaggccttcgaggacatgcaggagcagaacagccggctgttgcagcaa
ctgcgcgagaaggacgacgccaacttcaagctgatgagcgagcgcatcaaatccaaccag
atctacaagctgctcaaggaggagaaggaggagctcgccgaccaggtcctcgcgttcaag
acgcaggtggatgctcagctgctggtcgtgcagaagctggaggagaaagagggcgttctt
cagggcacactggccaccctggagaaagagctgtcggtcaggactcaagcactggaactc
aacaagaggaaggcggtggaggctgcacagctggcggaagaccagaaagtgcagctggag
cacacgcaggccaagctgaaggagattcaggtcgccgtcgccgagaaccgcacggcccgc
gagagggagagcagcaacctcaagcgagcgcaggaggatctgtccaggctgaggcggaag
ctggagaaacagaagaaggtggaggtgtactcggacgccgacgagatcctgcaggaggaa
atcaaccagtacaaggcaaagttgcgctgcccgtgttgcaacacgcgggacaaagacacg
gtgctcaccaagtgtttccacgtcttctgctacgaatgtctgaagatgcgctacgacacg
cgccagcggaagtgccccaagtgcaactgtgccttcggcgccaatgactttcaccgcatc
tacatcacctaa
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