Phycodurus eques (leafy seadragon): 133417927
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Entry
133417927 CDS
T09682
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pee03016
]
133417927 (trub1)
Enzymes [BR:
pee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
133417927 (trub1)
Transfer RNA biogenesis [BR:
pee03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
133417927 (trub1)
Prokaryotic type
133417927 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
GAIN_A
Pus10_C
Cluap1
Motif
Other DBs
NCBI-GeneID:
133417927
NCBI-ProteinID:
XP_061562142
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All DBs
Position
19:complement(18132178..18136876)
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AA seq
276 aa
AA seq
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MAASNAAAPLTSSLSKLQSLNGLFAIYKKRGPTSADVLNKLKETLLEEAGLRTANPRKRK
KQSLKMGHGGTLDSAASGVLVVGVGNGTKMLSTMLAGSKKYIAVAELGKATDTLDATGSV
TQEKDFKHVTKLELEEKLNSFVGDIMQVPPLYSALKKDGQRMSVLLKKGHKVEAKPARSV
TVYNLTLQEFKLPFFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELTRTKQGQFTLERH
ALHEEQWTLEHIVKSLQACPESEQSLDSVAAPEGGT
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgagcaacgcggctgcaccgctaacgagctcgctctcgaaactgcagtctttg
aatggactgtttgcaatttataaaaagcgagggccgacctctgcggatgtcttgaacaag
ctcaaagaaactctactcgaggaagccggcttgaggactgcgaacccgaggaagcggaag
aagcagagtctcaagatgggccacggagggacgctcgacagtgctgccagtggagtatta
gtggttggtgttgggaatggcaccaaaatgctcagcaccatgttggctggttccaagaaa
tacattgctgtcgcggagttggggaaagcgactgacactcttgatgctactggcagtgtt
actcaagagaaggacttcaaacatgttaccaagttggagttagaggagaagctgaacagt
tttgtcggcgatatcatgcaagtcccgccactttactcagcgctgaaaaaagatggccag
cgaatgtctgtccttctgaagaaaggtcacaaagttgaggcgaaaccggcgaggtccgtc
acggtgtacaacttgaccctgcaagagttcaagctgccgttcttcacattggatattgaa
tgcggtggcggattttacgtgaggagcttggtggatgacctgggaaaagcgctctcgtcg
tgcgctcacgtcaaggagctgacccgcaccaaacagggtcagttcaccttggagcggcat
gccttacacgaggagcaatggacactggaacacatcgtcaaatcgctgcaagcgtgccca
gagtcagaacagagtctggacagtgtggcagcgccggaaggcggaacttga
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