Phycodurus eques (leafy seadragon): 133417986
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Entry
133417986 CDS
T09682
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133417986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pee03041
]
133417986
Enzymes [BR:
pee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133417986
Spliceosome [BR:
pee03041
]
Complex C
Other components
Step II factors
133417986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
GIPC1_GH2
nSTAND3
AAA_16
Flavi_DEAD
T2SSE
TsaE
PhoH
ABC_tran
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
133417986
NCBI-ProteinID:
XP_061562262
LinkDB
All DBs
Position
19:complement(3121431..3131874)
Genome browser
AA seq
1199 aa
AA seq
DB search
MADADELSQLEFLSLVSKVCTELDNHLGISDKDLAEFVISLAEKEPTFDGFKALLLENGA
EFTDSLIGNLLRLIQTMKPPSKSSISKASEVQKPTSEKDRLKELFPALCRPNEAPPKLLD
EEDVKVASDAMKELEMFMPSVSGTDCKSDKGRSEKSRRRSRSRSRDRDRHRHRDRDRRRR
RHSRSRSRSRSRSRDRDRHRDRERSRRRERSSRWSARSPSPRRDQDWKDKHVDRPPPEEP
SVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKIK
VLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVGPDGSEEVSMRNPDGPTNLNLGPARELE
QDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDDETGILPKVDDEEDEDLEIEL
VEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERRELKQAAREAEMDSI
PMGLNKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSILEQ
RESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRV
AAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDSELGQYAI
IMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT
YPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLG
PDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK
QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ
RTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMA
EFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGD
HLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATV
RVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEY
MREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccgacgagctctcccagctcgagtttttatctttggtgtccaaagtgtgc
acggagctcgataaccatcttggaatcagtgacaaagatttagctgaattcgtcattagc
ctggcggaaaaagaacccacatttgacggattcaaagctctcctgctagaaaatggagca
gaatttacagactccctcattggcaacttgctcaggctcattcagaccatgaaacccccg
tctaagtcatctataagtaaagcctctgaagttcagaagccaacgtcggagaaggacagg
ctgaaggagctgttccctgcgctctgcagaccaaacgaagcaccgccgaaactcctcgac
gaagaggacgtgaaggtggcttctgacgccatgaaggagctggagatgttcatgcccagc
gtgagcggcaccgattgcaaaagcgacaagggccgctcggagaagagcagacgccgcagt
cggagcagaagccgcgaccgggaccgacacagacaccgggacagggaccgcaggaggcgc
cggcactcccgctcgcgctctaggtccaggtctcgctctagagaccgcgatcgccacaga
gaccgcgagcgctccaggaggcgagagcgatcgtcccgttggagcgcgcgctcgcccagc
ccccgcagagaccaagactggaaggacaagcacgtggaccgcccgcctccagaggagccg
tctgtgggcgacatctacaacggaaaagtcaccagcatcatgcagtttggatgctttgtc
cagctggagggcctcagaaaacgatgggaaggtttagtgcacatttccgagctgcgacga
gaaggcagagtggccaacgtggccgatgtggtcagcaaagggcaaagggtcaagatcaaa
gtcttgtccttcacgggctccaagaccagcctcagcatgaaagatgtggatcaagagacg
ggcgaggacctgaaccccaacaggaggaggaacgtgggccctgacggcagcgaagaggtg
agcatgaggaaccccgacgggcccaccaacctcaacctgggccccgcccgagagctggag
caggacgacacgctggagaggaagcggctcaccaagatctccgatccagagaaatgggag
atcaagcagatgatcgccgccaacgttttatccaaagaagaattccccgattttgacgac
gagacggggatccttcccaaagtcgacgacgaagaagatgaagacttggaaatcgagctg
gtggaagaggagccgcccttcctgagaggacacaccaaacagagcatggacatgagcccc
gtgaagattgtcaagaatccagacggctcgttgtcccaggcggccatgatgcagagcgcg
ctggccaaagagcggagggagctaaaacaggcggcgcgcgaggcggagatggactccatc
cccatggggcttaacaaacactgggtcgacccgctgcctgacgttgacggcaggcagatc
gcggccaacatgcgcggcatcggcatgatgcctaacgacatccccgaatggaagaagcac
gcgttcggcggcaacaaggcgtcgtacggaaagaagacgcagctgtccatcctggagcag
agggagagtttgcccatctataagctgaaggagcaactcatacaagccgtccacgacaac
cagattttgatcgtgatcggcgagaccggctccgggaagaccacgcagatcacgcagtac
ctggcggaggcgggctacaccacgcgcgggaagatcggctgcacgcagcctcgccgcgtg
gccgccatgtccgtcgccaagagggtctccgaggagtacggatgctgtctcggacaggag
gtgggctacaccatccgctttgaggactgcacgagccccgagacggtgatcaagtacatg
acggacggcatgctgctgagggagtgtctgatcgactctgagctgggacagtacgccatc
atcatgctggatgaagcccacgaaaggaccattcacaccgacgtcctctttggtctgctc
aagaagacggtgcagaagcgtacggacatgaagctgatcgtgacgtcagccacactggac
gccgtcaagttctcgcagtacttctacgaggcgcccatcttcaccatccctggtagaacg
tacccggtggaggtgctctacaccaaagagcccgagaccgactacctggacgccagcctc
atcaccgttatgcagatccacctgaccgagccccccggtgacatcctggtgtttctgacc
gggcaggaggagatcgacaccgcctgcgaaatcctctacgagcgcatgaagtcgctcggg
cccgatgttccggagctcatcattctgccggtttattcggcgctgccgagtgagatgcag
accaggatctttgaccccgcgccaccgggcagcagaaaagttgtcatagcaacaaacatc
gccgagacgtcgctgaccatcgacggcatctactacgtggtggaccccggttttgtcaag
cagaaagtctacaactccaagacgggcatcgaccagctggtggtgacgcccatctcgcag
gctcaagccaagcagagggcgggccgcgccggcaggacgggtcccggcaagtgttaccgg
ctgtacacggagcgggcgtacagggacgagatgttgaccaccaacgtgccggagatccag
aggaccaacttggccagcacggtgctctcgctcaaggccatgggcatcaacgacctgctc
tccttcgacttcatggacgctcctcccatggagacgctgatcacggccatggagcagctc
tacactttgggggcgctggacgacgaggggctgctcacgcgactggggcgaaggatggca
gaattccctttggagcccatgttgtgcaagatgttgatcatgtctgtgcatctgggctgc
agcgaggagatgctcaccatcgtatccatgttgtccgtgcagaacgtcttctacaggccc
aaggacaagcaggccttggcggatcagaagaaggccaagttccatcagcccgagggcgac
catctcaccctgctggctgtctacaactcgtggaagaacaacaagttctccaacccgtgg
tgctacgagaacttcatccaggctcgctcgctcaggagagcgcaggacatccgcaagcag
atgttgggcatcatggacagacacaagttggacgtggtgtcttgcggcaaagccaccgtg
cgggttcagaaagcaatctgcagcggtttcttccggaacgcagccaagaaggacccccag
gagggctacaggaccctcatagaccagcaggtggtctacatccacccgtccagcgctttg
ttcaaccgccagcctgaatgggtggtgtaccacgagctggtgctgaccaccaaggaatac
atgcgcgaggtgaccaccatcgacccgcgctggctggtggagttcgctccggccttcttc
aaggtgtccgacccgacgcgcctcagcaagcagaagaagcagcagcgtctggagcctctg
tacaaccgctacgaggaacccaacgcctggaggatctccagagccttccgcagacgctga
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