Phycodurus eques (leafy seadragon): 133418034
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Entry
133418034 CDS
T09682
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133418034 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pee03021
]
133418034 (smarcd2)
03036 Chromosome and associated proteins [BR:
pee03036
]
133418034 (smarcd2)
Transcription machinery [BR:
pee03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133418034 (smarcd2)
Chromosome and associated proteins [BR:
pee03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133418034 (smarcd2)
PBAF complex
133418034 (smarcd2)
GBAF(ncBAF) complex
133418034 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SAM_KSR1_N
Spiralin
ZapB
Motif
Other DBs
NCBI-GeneID:
133418034
NCBI-ProteinID:
XP_061562336
LinkDB
All DBs
Position
19:4340432..4350504
Genome browser
AA seq
500 aa
AA seq
DB search
MATRGNLPGPTMSPSLNPMNVGLAAALRMPGMPPAAAGYPRSMSSAPQYPQRPGLPLGRV
AGPMGSIGGQLPGPSYGGSGMPMRPGMRPPAPIDTSRKRLFHHQQQEALGGHRRGAKRRK
MADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYIS
NTYTPCKPEGDEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDKELYGPDNHL
VEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDLRLARLLGVHTQTRASI
MQALWLYIKNNKLQDSHEKEYINCNHYFKKIFGCGRMRFSEIPMKLAGLLQHPDPIVINH
MISVDPNDQKKTACYDIDVEVDDPLKTQMSSFLSSTTNQQEIAALETKIHETIEYINQLK
TERDFMLSFSNNPQDFIQDWLKSQCRDLKLMTDVTGNPEEERRTEFYQAPWMTEAVGRYV
YSKVQQRRQELEQVLGIRLT
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagaggaaacttgccgggcccgaccatgagccccagtttgaaccccatgaac
gtcggactcgccgccgccttgaggatgcccgggatgccgccagccgcggcaggatacccc
cgctccatgagcagcgcaccgcagtacccccagcgtccggggttgccactcggcagagtt
gcgggtcccatgggctcaatagggggtcagcttcccggtccctcatacggtggcagcggc
atgcccatgcggcccggcatgcggcctcctgcgcccatcgatacctcacgaaagcgctta
tttcatcaccagcagcaagaggcgctaggaggacaccggcgaggggcaaaaagacgcaag
atggccgacaaggttctaccacagagaatccgggacctggtgccagagtctcaggcctac
atggatctcttggcttttgagaggaaactagaccagaccatcgcccgtaagcgtatggag
atacaggaggctataaaaaagcccattatgcaaaagcgcaagctgaggatctacatttcc
aacacgtacaccccgtgcaagcccgagggcgacgaggcagagaaggtgtcctcttgggaa
ttgcgagtggagggaaaacttctggaagaacctggcaagcagaagaggaagttctcatct
ttctttaagagcttggtgatcgagctcgataaggagctctacggacccgacaaccacttg
gtggagtggcacagaatgcccaccactcaggagacggacggtttccaggtgaaaaggcct
ggcgacgtgaacgtcaaatgcacccttctgctcatgctcgaccaccagcctcctcagtac
aaactggatctgcggctggctcggctgctgggagtgcacacgcagacgcgggccagcatc
atgcaagctctttggctctacatcaagaacaacaagttgcaagacagtcacgagaaggag
tacatcaactgcaatcactatttcaagaagatatttggctgcggtcggatgaggttctct
gagattcccatgaaactggccgggctgctccagcatcctgaccccatcgtaatcaatcac
atgatcagcgtggaccccaatgaccagaagaagacggcgtgctatgacatcgacgtggag
gtggacgacccgctcaaaacccaaatgagcagctttttgtcgtccaccaccaaccagcaa
gaaatcgcggcgctggagacaaagatacacgagaccatcgagtacatcaaccagctgaag
accgagagagacttcatgttgagcttcagtaataatcctcaggacttcatccaggactgg
ctcaaatctcagtgtagagatctgaagctgatgacagatgtgacaggaaatccagaggag
gagaggaggactgagttctaccaggcgccatggatgacagaggcggtcggcagatacgtt
tattccaaagtgcagcagagaagacaagagctggagcaggttcttgggatccgactcacc
taa
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