Phycodurus eques (leafy seadragon): 133418245
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Entry
133418245 CDS
T09682
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133418245 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pee03400
]
133418245 (msh2)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
133418245 (msh2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
133418245
NCBI-ProteinID:
XP_061562726
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Position
19:complement(2863761..2881138)
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AA seq
929 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLNFFFSMPDKPDTTFRIFDRSDYYTVHGKDAAFAAKEVFKT
KGVIKHLGSGSRKLESVVLSKLNFEAFVRDLLLVRQYRVEVYKNQSKSSKEHDWKIEYKA
SPGNLTQFEEILFGGENGAEGFAGVVAVRVAAGVVGVGYVDAAQRTMGVCEFPDNEVFSN
LESLLVQVGPKECLLAQGENSADGNKLREVVQRGGLLVSDRKRAEFSGKDLVQDLNRLLR
AKRGETVASNTLPELDKRVAMSCLAAVVRYLELLSDESNFNSFSLTSMELGQYMRLDNAA
VRALNLFQGAPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLLDKTKIEERLDLVESL
VRDSELRQTCQEDLLRRFPDLQRLAKKFQRHSATLQDCYRVHQAVGHIPALVAVLERYSG
NHQVLLEAVFISPLRDLQSDFSKYQEMIETTLDMNQIEHHEFLVKASFDPVLSELREKMD
AMEKSMQAVLNAAAKELGLEAGKTVKLESSAVLGFYLRITCKEEKSLRNNKKFTMLDVQK
NGVRFTNSKLSALNEDYGRSREEYEEAQNAIVKEIINIASGYVDPLQALADVVALLDAVV
SFATASVSAPVPYVRPRLLPDGRRRRLELRRARHPCMETDADTCFIPNDVAFVQGEKSFY
IITGPNMGGKSTYIRQVGVVALMAQIGCFVPCEEAELSVIDSILARVGAGDSQTKGVSTF
MSEMLETAAILRSATEKSLVIVDELGRGTSTYDGFGLAWAISEHVAAEIGCFCLFATHFH
ELTALAAQRPTVRNLHVTALTSHDTLTMLYRVKPGVCDQSFGIHVAELARFPPSVVAMAK
EKAEELEEFQEPAASARGGGSEAKRRRSEKRVGEDLIQDFLEEAKSLPAAAMTEDEVRVA
LRRMKEALLAKNNVYVSEVLARLLPVTTS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcccaaacaaaacctctctatggacagcgcggccgagcacggcttcctc
aacttcttcttctccatgccggacaagccagacaccacgttccgcatcttcgaccgcagc
gactactacacggtccacgggaaagacgccgcattcgccgcgaaggaagttttcaagacg
aagggcgtcatcaagcacttgggttccgggagtcgtaaattggaaagtgtggttctgagc
aagctcaactttgaggcttttgtgagggatttgctcctggtcaggcagtaccgcgtcgag
gtgtacaagaaccaaagcaagagcagcaaggagcacgactggaagattgagtacaaggcc
tctccaggaaacctcacccagttcgaggagatcttgtttggcggcgaaaatggcgcggaa
ggcttcgcaggcgttgtagcagtgcgcgtcgcagctggcgtggtgggcgtgggctacgtg
gacgcggcgcaacgcactatgggcgtgtgcgagttccccgacaacgaggtcttctccaac
ctggagtcgctgctggtccaggtcggtcccaaagagtgtctcctcgctcagggggagaac
agcgctgatggcaacaagctacgggaggtggtgcagcgcggcggcctgcttgtctcggac
aggaagcgagccgagttcagtggcaaggacttggtccaggacctgaacaggctgctgaga
gccaaacgtggagagacggtggccagcaacacccttcccgagctggacaaacgggtggcc
atgtcctgcttggccgcagtggtgcgctacctggagctgctctccgacgagtccaacttc
aactccttcagcctgacctcaatggagctgggtcagtacatgaggctggacaacgctgcc
gtcagggcgctcaacctcttccagggtgcacccgacgacaccagcggtgcccactcgttg
gccggtctgctgaacaagtgccgcacgcctcagggacagaggctggtcaaccagtggatc
aaacagccgctcctagacaaaactaaaatagaggagaggctggacctggtggagagtttg
gtgcgcgactcggagctgaggcagacgtgccaggaggaccttctgcggcggttccccgat
ctccagcgtctggccaagaagttccaacgccacagtgccaccttgcaggactgctaccgc
gtgcaccaggccgttggccacatccctgcgctcgtggctgtgctggaaagatattcgggc
aaccatcaggtcctgctggaggcggttttcatatcccccctcagggacctgcagagtgac
ttcagcaagtaccaggagatgattgagaccacattggacatgaaccagattgagcaccat
gagttcctggtgaaggcctcctttgatcccgtgttgagtgagctgcgagagaaaatggac
gccatggagaagagcatgcaggctgtgctcaacgccgctgccaaagagctaggtttggag
gccggcaagacggtgaagctggagtcgagcgccgtgctgggcttctacctgcgcatcacc
tgcaaggaggagaagagcctgaggaacaacaagaagttcaccatgctggatgtgcagaag
aacggtgtgcgcttcacaaacagcaagctgagtgcgctcaacgaggactacgggcgcagc
agggaggagtacgaggaggcgcagaacgccatcgtcaaagagatcatcaacatcgcctca
ggctacgtggatcctttgcaggcgctggccgacgtggtggcgttgctggacgcggtggtc
agcttcgccaccgcgtccgtctcggcccccgtgccctacgtgcggccgcgcctgctgccc
gacggccgccgccgccgcctggagctgcggcgggcgcgccacccctgcatggagacggac
gccgacacgtgcttcatccccaacgacgtcgccttcgtccagggggagaagagcttctac
atcatcacagggccaaacatgggcgggaagtcgacgtacatccgtcaggtgggcgtggtc
gctttgatggctcaaatcggctgcttcgtgccgtgcgaggaggcggagctcagcgtgatt
gacagcatcctggcccgggtgggggcaggagacagccagacgaagggagtgtccaccttc
atgtccgagatgctggagacggccgccatcttgcgctcggccacggagaagtcgctggtc
atcgtggacgagctgggccgcggcacgtccacctacgacggcttcggcctggcctgggcc
atcagcgagcacgtcgccgctgagatcggctgcttctgtctgttcgccacgcacttccac
gagctgacggcgctggcggcgcagcggcccaccgtgcgcaacctgcacgtgacggcgctg
acgtcgcacgacacgctcaccatgctctacagggtcaagccgggtgtgtgcgaccagagt
ttcgggatccacgtggccgagttggctcgtttcccgccgtcggtggtcgccatggcgaag
gagaaggccgaggagctggaagagtttcaggagccggctgcgtccgcgagggggggcggg
tccgaggccaagagacggcgcagcgaaaaacgggtcggagaagacttgatccaggacttc
ctggaggaagccaagtctctccctgccgccgccatgacggaggacgaggtgagggtggcg
ttgcggcgaatgaaggaggcgctgctcgccaaaaacaacgtgtacgtctccgaggtgcta
gcgcgattgcttcctgtcacaacgtcctga
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