Phycodurus eques (leafy seadragon): 133418278
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Entry
133418278 CDS
T09682
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee03420
Nucleotide excision repair
pee03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
133418278 (ercc4)
03460 Fanconi anemia pathway
133418278 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pee03032
]
133418278 (ercc4)
03400 DNA repair and recombination proteins [BR:
pee03400
]
133418278 (ercc4)
DNA replication proteins [BR:
pee03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133418278 (ercc4)
DNA repair and recombination proteins [BR:
pee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
133418278 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
N-HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
133418278
NCBI-ProteinID:
XP_061562791
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All DBs
Position
19:complement(13054005..13066637)
Genome browser
AA seq
909 aa
AA seq
DB search
MAGPLLEFETEMFLSLFGCDGLLAVAEGMGIDRILLQFMRVYSEQGSLVLLLNTTTPEQE
YFTEQLRVEGVTHLPRTVTSEVQGTERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALDRHKPDVVELHVSLTPSMKAIQSSILDIMGACLKELKCYNPTLEAE
DLSLENTLSNAFDKTIRHYLDPLWHQLGSKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKNFGSNSGWLFLDSSTSMFVNARSRVYHIPESKKKLKVGAEAEKKQPPSASEV
KRVLVLEKSPKWEALSEVLQEIENENKNSQYEPGRVLICASDDRTCAQLQQYIRHGAEWL
LNRLYTRTIAKRDPSAASAFELANHKKDKGLLKSGSKGKGRGNAKGKEPKKKTSKAKSRP
SLTLTQMIGKEQTVEAAVMGSSEDEDDFGDEDDMTEENALKLDLSSDAYYAVLKEPLMVI
HPLKGCTDPHSLTRVLHEVEPTFVVLYDAELSFVRQLELYKACRPGKALRVYFLIYGGST
EEQKYLTGLSKEKKAFEHLIKEKATMVIPEEREGREDTNLDLARNLDPANATTNTRKAGG
QDQPKEPSRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPDICVERKSVSDLIG
SLQSGRLYTQCLSMNRYYRKPVLLIEFDPAKPFSLMARSDFRHEISANDVSSKLTLLTLH
FPRLRILWCPSPHATGELFLELKKGRKEPDAVAAQAVTAESDVVAESTELYNAGPHDFLL
KMPGVNTKNFRALIRNADSLADLTKLSQDKLAEILENASNAKLLYAFLHNVADVQIPPQK
GNKDAINLI
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccctctgctggagtttgagaccgaaatgtttctgagcctgttcggctgtgac
gggctgctcgcggtggcggaggggatggggatagaccgtatcctgctgcagttcatgcgg
gtgtactcggagcaaggcagcctggttctacttcttaacaccaccacccccgagcaggag
tattttacggagcagttgcgagtggaaggtgtgacccacttgccgaggacggtgaccagc
gaggtccaaggtaccgagcgatacaatgtgtacaccgagggaggggtactgtttgtcacc
agcagaatcctggtggtcgacttcctcaccgaccgcatacctgcccatcttatatcaggc
atcctggtataccgcgctcacaaaatcatcgagtcgtgtcaggaagcgtttatcctgcga
ctgttccgacagaaaaacaagacgggcttcatcaaagccttcaccgacaaagccacagcc
ttttcctcaggcttctgccaggtggagcgtgtgatgcggaacctctttgtcaagaagcta
tacctttggcccagattccaagcgtcagtgaacacagccctagacagacacaagccggat
gtggtggaactccatgtctcattgactccttctatgaaggccatccagagctccatcttg
gacatcatgggtgcctgtctgaaggagctgaaatgctacaatcccaccttggaggcggag
gatctctccttggaaaacacacttagcaatgcctttgataagaccatccgccattacctg
gaccccttgtggcaccagctgggatcaaagacgaaggcgctggtccaggacctgaaggtc
ctgcgggttctgctgctgtacctcacccagtacgactgtgtcacgttcctcaatctgctc
gaatcccttcgctccagccaaaaaaactttggctccaactcagggtggctcttcttggac
tccagtacctccatgtttgtaaatgccaggtccagagtataccacatcccagaaagcaag
aagaaacttaaagtgggagctgaagcagaaaaaaaacagccaccctccgcttcagaggtg
aagcgggtgctggtgctggagaagagcccaaagtgggaggctctctctgaagtcctgcag
gagattgagaatgagaacaagaactcccagtatgaaccaggtcgcgtgctgatctgcgcc
agcgatgacaggacttgtgctcagctgcagcagtacatcaggcacggtgcagagtggctc
ctgaacagactgtacacacgtaccatcgccaaacgagatccgtcggccgcctctgctttt
gagttggcgaatcacaaaaaagacaagggccttctcaaaagcgggtccaagggaaagggc
cgagggaacgcgaaagggaaggagccgaaaaaaaagactagcaaggctaaaagcagaccc
tctctgaccttgactcagatgattggtaaagagcaaaccgttgaagcggcggtgatgggc
agcagtgaggatgaggatgactttggcgatgaagacgatatgacggaggaaaatgctctg
aagctggatttgtcatctgacgcttactacgcagtcctgaaggagcccctgatggtcatt
cacccactgaagggttgcacggacccccacagcctgacgcgtgtgttacatgaagtggag
cccacgtttgtggtgctttacgacgctgaactcagctttgtgcgccagctggagctctac
aaagcctgtcgacctggcaaggcactcagggtgtacttcctcatctatggcggctcaaca
gaggagcagaaatacctgaccgggctatccaaagagaagaaagcctttgaacatctcatt
aaggaaaaggctactatggtcatcccagaggagagggagggacgagaagacaccaacttg
gaccttgccaggaatttagaccctgccaacgccaccaccaacactcgcaaagccggaggc
caagaccagcctaaggagccctcccgagtcattgtagacatgcgtgagttccgcagtgag
cttccctctctgctccaccgccgtggcctggacatcgagcctgtcactttggaagtcggg
gactacatccttacgccggacatttgcgtggaacgcaagagtgtcagcgatctgattggc
tcattgcagagcggtcgcctctatacccagtgcctctccatgaatcgctattacagaaaa
ccagtgttgctcatcgagttcgacccggcgaagcccttttccctaatggcccgctccgac
ttccgccacgagatatctgccaacgatgtttcctccaaactcaccttgctcacgttacat
ttcccacgtctccgcatcctctggtgcccctcgccgcacgccacaggggagctttttctg
gagctgaaaaaaggtcgcaaagaacctgacgccgtggcggctcaagcggtcacagccgaa
tcagacgtggttgctgaatcgacagagctctataatgccgggccgcacgacttcttgctc
aagatgccgggggtcaacacgaaaaactttcgagctctcataagaaatgctgacagcctg
gcagatctaaccaaactgagccaggacaagctggcagaaatacttgagaatgccagtaac
gccaagttgctctatgcgttcttgcataatgttgcagatgttcaaattccaccacaaaag
gggaacaaagatgccatcaatttaatatag
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