Syntrophotalea acetylenivorans: A7E78_00625
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Entry
A7E78_00625 CDS
T04594
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pef
Syntrophotalea acetylenivorans
Brite
KEGG Orthology (KO) [BR:
pef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pef03019
]
A7E78_00625
Messenger RNA biogenesis [BR:
pef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A7E78_00625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
DUF2332
Cas3_HD
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
APG26498
UniProt:
A0A1L3GLF6
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Position
139501..140643
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AA seq
380 aa
AA seq
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MKELFVAQIKERDQVNGQFLVREKNTAMAKNGKPYMTLKLMDRTGEVEGRVWDRVEELSA
LFDKDDFVRVVGKASVYLGKMQLVVQRLEKIAEQDVDLADYLPVSSRPVDEMLAELRQLV
ASLEAPHYRELMEAFLADDEFLQGFVQAPAAKTIHHVYLGGLLEHSLAVAQLADDIGRRY
PGVQRDLLLTGALLHDIGKVAELCYERSFGYTDTGKLLGHIVIGVEMVEAKLRQLENFPV
PAGLLLKHLLLSHHGQYEYGSPKRPKTLEAVILNYLDDLDSKINGVQTHLQKEPDNDASW
SGYHRIYDRYFFKETGEQPIGATEPLPVPAREAAPPVKEEKPAKRRRQPATKDKDLSFSL
ADQLKDKTLNLFADLDEGDN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagagctttttgtagcacagattaaagaaagagatcaggtcaatggccagtttctg
gtgcgggaaaaaaacaccgctatggccaaaaacggtaaaccctacatgaccttgaagttg
atggatcgtaccggtgaagtcgagggaagagtctgggaccgtgtagaggaactgtcggcg
ctgtttgacaaagacgattttgtgcgtgttgtgggcaaggccagcgtctatctcggtaag
atgcaactggtcgtccagcggttggaaaagattgctgaacaggatgtggacctggcggat
tatctgccggtcagcagtcggccggtggatgagatgctggcggaattgcggcaactggtg
gccagtctggaggccccccattaccgtgaattgatggaagcctttctcgccgacgatgag
ttccttcagggttttgttcaagcaccggcagccaaaaccatccaccatgtctatctcggt
gggttgttagaacattccctggcggtggcccagctggccgacgatatcggccgtcgttat
ccaggggtgcagcgtgatctgctcttgaccggagctttattgcacgatatcggtaaggtc
gccgaactctgttacgagcgctcttttggctataccgatacggggaaattgcttggtcac
atcgtcatcggtgtggagatggtcgaggccaagctgcgtcagttggaaaattttcccgtg
ccggcagggctgttgctgaaacatctgctcctttcccatcatggtcaatatgagtacgga
tcaccaaagcgtcccaaaacgctggaggcggttattctcaattatctggatgatctcgac
agcaagatcaacggcgtgcagacccatttgcagaaagaacccgataatgatgcctcctgg
agtggctatcatcgcatttatgaccggtattttttcaaggaaaccggagaacagccgatt
ggtgcgaccgaacccttaccggtgccggctcgtgaggccgcaccgccggtcaaagaggaa
aaaccagccaaacgccgtcgccagccggctaccaaggataaagatcttagcttcagcctg
gctgatcagctgaaagataagaccttgaacctgtttgccgaccttgatgaaggggataac
tga
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