Syntrophotalea acetylenivorans: A7E78_04250
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Entry
A7E78_04250 CDS
T04594
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pef
Syntrophotalea acetylenivorans
Brite
KEGG Orthology (KO) [BR:
pef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pef03032
]
A7E78_04250
03036 Chromosome and associated proteins [BR:
pef03036
]
A7E78_04250
03400 DNA repair and recombination proteins [BR:
pef03400
]
A7E78_04250
DNA replication proteins [BR:
pef03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A7E78_04250
Chromosome and associated proteins [BR:
pef03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
A7E78_04250
DNA repair and recombination proteins [BR:
pef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
A7E78_04250
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
APG27112
UniProt:
A0A1L3GMF6
LinkDB
All DBs
Position
complement(943376..943663)
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AA seq
95 aa
AA seq
DB search
MTKSELIEQLSYSNNLLGKKESELVVNTLLEGIRNALVEGERVEIRGFGSFTVRTRDARE
ARNPKSGEVVQIAAKKTAFFKTGKELRERVDNGNI
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaagtgaattgatcgaacaactgtcctatagcaacaatttattggggaaaaaa
gaatccgagctggtggtgaataccttgcttgaaggaatacgcaatgccctggttgaggga
gagcgggtagaaattcgtggtttcggctcctttaccgttcgtactcgggatgcccgtgaa
gctcgtaatcccaagagtggtgaagtcgtgcaaattgctgctaaaaagacagcctttttt
aagaccggaaaagagctgcgcgagcgggtcgataacgggaatatctag
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