Syntrophotalea acetylenivorans: A7E78_05185
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Entry
A7E78_05185 CDS
T04594
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pef
Syntrophotalea acetylenivorans
Pathway
pef03030
DNA replication
pef03430
Mismatch repair
pef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7E78_05185 (dnaE)
03430 Mismatch repair
A7E78_05185 (dnaE)
03440 Homologous recombination
A7E78_05185 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pef03032
]
A7E78_05185 (dnaE)
03400 DNA repair and recombination proteins [BR:
pef03400
]
A7E78_05185 (dnaE)
Enzymes [BR:
pef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A7E78_05185 (dnaE)
DNA replication proteins [BR:
pef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A7E78_05185 (dnaE)
DNA repair and recombination proteins [BR:
pef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A7E78_05185 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
APG27286
UniProt:
A0A1L3GMW6
LinkDB
All DBs
Position
complement(1156449..1159922)
Genome browser
AA seq
1157 aa
AA seq
DB search
MTPPGFVHLHLHSQYSLLDGAIKIGDLVKRAVACQMPALAVTDHGNMFGAVEFYSKAKAA
GIKPILGCEVYVAPGSRFDKTNARGSSEASHHFMLLCQNLTGYRNLCHLVSAAYREGFYY
KPRIDWQLLAEHHEGLIGMTACLGGEIPSLINQGKMAEAKRRTEEMARIFDGDRLYLELQ
ENFLTEQDVANKGLIELSRELSLPLVATNDCHYLTREDAYAHEVLLSIQTGKTMDDPNRM
RFPNEEFYVKSPEEMAAMFKEVPEALSNTLAIAERCNLELDFDTYHFPQYEKPQEKTLDE
VLAEDSRKGLDERLEEIRRIRADFSAEKEQEYRERLEIELDCIRSMGFPGYFLIVADFIN
WAKDNGIPVGPGRGSAAGSLVAYAIRITDIDPMPYNLLFERFLNPERVSMPDIDVDFCIY
GREEVINYVRQKYGEANVAQIITFGTMMAKGVVRDVGRALNMPYGDVDKIAKLVPAVLNI
TLKEALEQEPKLKELADKEPQVAKLLEVALALEGLTRHASTHAAGVVVTPNALPEYLPLY
TDPKSGGQVTQFTMKFVEQIGLVKFDFLGLKTLTVIDNAVRLIREGRDPDFDLQLVRDDD
EETYRLLSSGNTTGVFQLESSGMKEMLVKLKPSCFEDIIAACALYRPGPLGSGMVDDFIL
RKHGKKEITYDFPQLEPILKDTYGVIVYQEQVMLIGQVLANYSLGGADLLRRAMGKKKPE
EMAKQKDLFMAGAKENNLDLKKAEAVFDLMEKFAAYGFNKSHSAAYALVAYHTAYLKAHY
PVEFMAALLTEDMENTDKVIKNINEVRSMGIEVLPPDINASSRSFTVHDKAIRFGLGAVK
GVGGAAVEAIMESRQEEPFSTLNDFCERADLRKVNKKVADALIKCGAFDSLGGKRAQYLE
VLEDAMEVGQKVQREKAEGQESLFGTEELVSHRGNGYGQLPDMEEWPEKVLLGFEKEALG
FYITGHPLDRYVDTLKRFASCDTAGLPERADKEEVQVGGMVAGLKELMTKKGDRMAFVTL
EDLSGFVEMVVFPEVYQASAELLRGEAPLLVSGTLDVGEETCKLMAQKIVALQDVNLQQT
TRVNFRLNTTGLDSDQLRGLRDIVARHRGKCRAMVRLLIPNRSETLLRLPDDLLVSASDE
IMEEAERLFGYNVVTFE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcccggtttcgtacatttacatcttcacagtcaatacagtcttctcgatggt
gccattaaaatcggagacctggttaagcgtgccgtggcctgccagatgcccgctctggcc
gtaaccgatcacggcaacatgtttggcgccgtcgaattttacagcaaggccaaagcggca
ggtatcaaaccgattctcggttgcgaagtctatgtggcgcccggttcccgttttgataaa
accaatgcccggggctcttccgaagcatctcaccatttcatgctgctgtgccagaacctg
acgggctaccgcaatctctgccacctggtgtcggcagcttatcgcgaaggcttctactac
aagccccgtatcgactggcaactgctggcagagcaccatgaaggcttgatcggcatgacc
gcctgtctcggcggtgagattccatccttgatcaatcaaggcaagatggccgaggccaag
cgccgcactgaggaaatggcccggattttcgacggggaccgtctttatctcgaattgcag
gaaaacttcctcaccgagcaggatgtggctaataagggacttatcgagctctccagggaa
ctcagccttccgttggtggctaccaacgactgccactatctgacccgggaagatgcctac
gcccatgaggtattgctgtccattcagaccggcaagaccatggacgatcccaaccggatg
cgctttcccaacgaagagttttacgtcaaatctcccgaagaaatggccgctatgttcaag
gaggtgcccgaggccttgagcaataccttggccatcgccgagcgctgtaacctggaactc
gatttcgacacctatcactttccgcaatacgaaaagcctcaggaaaagacccttgacgag
gttctggctgaagattctcgcaaggggctcgatgagcgactggaggagattcgccggatt
cgagcggatttctccgccgaaaaagagcaggagtaccgcgagcgcctcgagattgagctg
gactgcatccgctccatggggttccccggctattttctgatcgtcgccgatttcattaac
tgggccaaagacaatgggataccggtcggtcccggccgcggcagtgccgcgggcagcctg
gtggcctatgccatccgcattaccgatatcgaccccatgccctacaacctgctctttgag
cgattcctcaacccggaacgggtgtcgatgcccgatatcgacgtcgatttctgtatttac
ggccgtgaagaggtcattaactacgtccgtcagaagtacggcgaggccaacgtcgcccag
atcatcacctttggtaccatgatggccaaaggggtggtgcgggacgtcggtcgtgccctc
aatatgccctacggcgatgtggacaagatcgccaagctggtgccggcggtactcaatatc
actttgaaggaggcgctggaacaggagccgaaactcaaggagctggccgacaaagagccg
caggtagccaagctgctggaagttgccctggctcttgaagggttgacccgtcatgcctcg
actcatgctgccggggtggtggtgacgcccaacgctctgcccgaatatctgcctctctat
accgatcctaaatccggtggtcaggtaacccagttcaccatgaagttcgtcgaacagatc
gggttggtcaagttcgattttctcggactcaagactctgaccgttatcgacaatgcggtg
cgcctgatccgtgaggggagggaccccgatttcgatcttcagctggtgcgcgacgatgac
gaagagacctaccgtctgctgtcctccggcaataccaccggtgtttttcagctcgagtcc
tcgggtatgaaggagatgctggtcaagcttaagccgagctgctttgaagatatcatcgcc
gcctgtgccctctatcgccccgggcccctcggctcgggaatggttgatgattttatcctg
cggaagcacggcaagaaggaaatcacctacgactttccccagcttgagccgatcctcaaa
gatacctacggggttatcgtctaccaggaacaggttatgctcatcgggcaggtgttggcc
aactacagtctcggtggggccgacttgctgcgtcgggccatgggtaagaagaagcccgaa
gagatggccaagcaaaaagacctcttcatggccggtgccaaggagaacaacctcgacctg
aagaaggccgaggcggtcttcgatctgatggagaagttcgcagcctatggcttcaataaa
tctcactcggctgcttacgctctggtggcgtaccatactgcctatctcaaggcccattat
cctgtagaattcatggccgccttgctcaccgaggatatggagaacaccgacaaagtcatc
aagaacatcaacgaggtgcgctctatgggcatcgaggtgctgccccccgatattaatgcc
tcgagtcgttcctttaccgtgcacgataaagcaatccgattcggactcggtgcggtcaag
ggggtcggcggcgcggccgtcgaagccattatggagagccgccaggaagaaccctttagc
accttgaacgatttctgtgaacgagctgatttgcgcaaggtcaacaaaaaggtggcagac
gcgctgattaaatgcggtgctttcgactctctggggggcaagcgtgcccagtatctggag
gttctggaagacgcgatggaggttggacagaaggtccagcgagagaaggcagaaggtcag
gaatcgctcttcggtaccgaagaacttgtttcccatcgcggtaacggttatggtcagttg
ccggacatggaggaatggcctgagaaagtgttgctcggctttgaaaaagaagccctcggc
ttctatatcaccggtcatcctctggatcgttatgtcgacaccttgaaacgctttgccagt
tgcgataccgccggcttgccggaacgggccgataaggaggaagttcaggtcggcgggatg
gttgccgggctgaaggagttgatgacaaaaaagggcgaccgcatggcctttgtcaccctt
gaggatctgagcggatttgttgagatggtggttttcccggaggtctatcaagcttcagcg
gaactgctgagaggcgaagcgccgctgctggtctccggtacccttgatgttggcgaagag
acatgcaagctcatggctcaaaaaattgttgctctgcaggacgttaatttgcaacagacc
acgcgagtcaatttccgcctgaatactaccggccttgacagcgatcaactgcgggggttg
cgggatattgtggcacgacaccgtggaaagtgccgggccatggtccggttgttgatccct
aaccgcagcgagacgctgctcaggcttcccgatgatctgctggtgtctgccagtgatgaa
ataatggaagaggctgaacggttgttcggctataatgtggttaccttcgagtag
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