Syntrophotalea acetylenivorans: A7E78_08360
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Entry
A7E78_08360 CDS
T04594
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pef
Syntrophotalea acetylenivorans
Brite
KEGG Orthology (KO) [BR:
pef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pef03032
]
A7E78_08360
03400 DNA repair and recombination proteins [BR:
pef03400
]
A7E78_08360
Enzymes [BR:
pef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A7E78_08360
DNA replication proteins [BR:
pef03032
]
Prokaryotic type
DNA Topoisomerases
A7E78_08360
DNA repair and recombination proteins [BR:
pef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A7E78_08360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
APG27845
UniProt:
A0A1L3GPL9
LinkDB
All DBs
Position
1843177..1845603
Genome browser
AA seq
808 aa
AA seq
DB search
MAKSLVIVESPAKAKTIEKFLGPNYKVLASYGHVRALPSKQGSVDVEAEFQPLYHVLPES
QKQIALLKKEADKSDEIILATDPDREGEAIAWHLLEALGIDESGKSPTVKRVTFHEITKN
AVQEAVANPGHISRDLVDAQQARSILDYLVGFNLSPFLWKKIRYGLSAGRVQSVALRLIC
DREKEVQAFKPEEYWTIEADLQTEAGTTFRARLQSVDGNSLKKFDIANETAATALVDALT
DQTIQVANIKRTEKKRQPSAPFTTSTLQQEASRKLGFSARKTMSLAQKLYEGIDIGNGAE
GLITYMRTDSVALAEVAQQEAKEVITSLYGADYALKKPRTFKNRAKNAQEAHEAVRPTTI
ANTPDKVKPHLSSDQYRLYRLIWMRTVASQMAAAQLDATSVDLSAGERFILRASGQVIRF
AGFMKLYIESSDDAEEKDDATLPPLQEQETVSCQELLPEQHFTQPPPRFSEARLVKTLEE
YGIGRPSTYASIINTLTARKYVRLEKRVFYPEDVGMVVSDLLSNHFKQYVDYNFTAQLEE
DLDAISRGETKWQPLLKEFWEPFITLLKQKETEISKQDVTTEKTDRECPECKKPLVIKLG
RAGRFMACSGFPDCRYTEALNGEAKEEPVMSDQKCEKCGAPMLIKEGRYGKFYACSAYPA
CKNIQPLVKPKALGITCPACKEGELQEKKSRYGKIFYSCNRYPKCKYALWDLPIEEACPK
CEFPLIVEKVTKRDGTYRKCPQEECDWKLVLVPPVKKAAKKPAAKKAAPKKTAAKKTATK
KTTAAKAPPKKKAATKTKKAAATKPKKD
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcactagtgatcgtcgagtcccccgcaaaagccaaaaccatcgaaaaattt
cttgggccaaattacaaggtattggcttcctacggccacgtccgagcgctgccgagcaaa
cagggatccgtcgatgtcgaagctgaatttcagcccctctatcatgttttgcctgaaagc
caaaaacaaatcgcactgctgaaaaaagaagcggacaaaagcgatgaaataatcctcgca
actgaccccgaccgcgaaggtgaagctatcgcctggcaccttctggaagcccttgggatc
gatgaatcgggaaaatctcccacggtcaagagggtgacctttcatgaaatcacaaaaaat
gcggttcaggaggcggtagccaatccgggccacatctcacgggatctggtcgacgcccaa
caggcccgctccattctcgactatctggtcggcttcaacctttctccttttttgtggaaa
aaaattcgctatggtctctctgccggccgcgtccaatcggtagccctgcggctgatttgc
gatcgcgaaaaagaagtccaggcctttaagcccgaagagtactggacgatcgaggctgac
ctgcagacggaagctggtaccaccttccgagcccgcttgcaaagtgtcgacggaaattct
ctaaaaaagttcgacatcgccaacgaaaccgcggccactgccctggttgacgccctgacc
gaccagaccattcaggtcgccaatatcaagcgcacggaaaaaaagcgtcagccgtcagct
ccgtttaccaccagtaccttgcaacaggaagccagtcgcaaactgggattctcggcccgc
aagaccatgagcctggcacaaaagctctatgaaggcatcgacatcggcaacggcgccgag
ggcctgatcacctatatgcgtaccgattcggtcgccctggccgaggtcgctcaacaggaa
gccaaagaggtcatcaccagcctctacggggcggactatgctctgaaaaaaccccgtacc
ttcaaaaaccgggcgaagaacgcccaggaagctcacgaggcggtccggccgaccaccatt
gccaacaccccggacaaggtgaagccccacctcagctccgaccagtaccggctctaccgc
ctgatctggatgcgtaccgtcgcctcgcagatggccgcggctcaactcgatgcgaccagt
gtcgacctcagtgcgggtgaacgcttcatcctgcgcgcttccggccaggtaattcgcttc
gcgggcttcatgaagctgtacatcgagagcagcgacgatgccgaggaaaaggacgacgcg
accctgcctccgctccaggagcaggagaccgtcagttgccaggagctgctgccggagcag
cacttcactcagccgcccccccgcttcagcgaggcccgcctggtaaaaactctggaagaa
tatggcattggccgcccatcaacctatgcctccatcatcaatacgctgacggcccgaaaa
tacgtgcggctggagaaacgggttttctatcccgaggatgtcggcatggtagtcagcgat
cttttgtccaaccatttcaagcagtatgtcgactacaacttcaccgcgcaactcgaggaa
gatctcgatgccatttcccgcggcgaaaccaaatggcaaccgcttctcaaagagttctgg
gaaccattcatcaccctgctgaagcagaaggaaaccgaaatttccaagcaggatgtcacc
accgaaaagaccgatcgggaatgccccgaatgcaaaaaacctctggtcatcaagctcggc
cgcgccggccgttttatggcctgcagcggttttcccgactgccgctacaccgaggctctg
aacggcgaggccaaagaagaaccggtgatgtccgaccagaagtgcgaaaaatgcggcgcg
cccatgctgatcaaagaaggccgctacggtaaattttacgcctgctccgcctatccggcc
tgcaaaaacattcaacccctggtcaagcccaaagccctggggattacctgcccagcctgt
aaggagggcgaactgcaagagaaaaagagccgctacggcaagatcttctactcttgcaac
cgttatcccaaatgcaaatatgccctatgggatctgcccattgaagaggcttgtccaaaa
tgtgagttcccgttgattgtggaaaaagttaccaagcgggacggaacctatcgcaagtgc
ccacaggaagaatgcgactggaagctggtgctggtgccgccagtgaaaaaagccgcgaag
aaaccagcggccaaaaaggcggcccctaaaaaaaccgcggcaaaaaaaaccgcaactaaa
aagaccaccgcggcaaaagctccacccaagaagaaggccgccactaaaactaaaaaggca
gcggcgaccaagcctaaaaaggactga
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