KEGG   Syntrophotalea acetylenivorans: A7E78_09935
Entry
A7E78_09935       CDS       T04594                                 
Name
(GenBank) ribonuclease HI
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
pef  Syntrophotalea acetylenivorans
Pathway
pef03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A7E78_09935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pef03032]
    A7E78_09935
Enzymes [BR:pef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     A7E78_09935
DNA replication proteins [BR:pef03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    A7E78_09935
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     A7E78_09935
   Elongation factors (archaeal)
     A7E78_09935
SSDB
Motif
Pfam: 5_3_exonuc_N RNase_H 5_3_exonuc HHH_2 HHH_5 DNA_pol_lambd_f TopoV_HHH NYN_YacP
Other DBs
NCBI-ProteinID: APG28134
UniProt: A0A1L3GQD2
LinkDB
Position
complement(2189654..2191105)
AA seq 483 aa
MNESPQLYLLDGSSYIYRAYYGIRDVATADGTPTNAVYGFTRMLLGLLQEHRPDYLAVVF
DRPREETFRREIYPEYKAHREAMPEDLPPQIAAIRQVLQALQIPSLEAPGFEADDVIATL
ARRYAAEGIEVTVVTGDKDLMQIVDDKIFLLDTMKDTRSGPKEVLERFGVPPELVADVLG
LAGDTSDNIPGVPGIGEKTAAELVQRFGSLEDVLKWTNLVNGRKRRENLQAHADQARLSK
TLATLRDDVPLESSLVELERQSPNLTDLIPLLRQLEFEALEIVFTPPPPGVVEIYSDGSG
RDSGPGGYGVVLRYGEHEKELSGFEPVATSQRMELIAAIRGLEALNKPQTVRLYSDSQYL
VRGMSDWIDGWVRDGRLETPGALANQDLWQQLLALSRQHKIHWEWVRGHAGHPFNERCDK
LAKRAAEEGVQAAGADRDQGAVPEEEVAEPVAPVSLAALRLEPSLVEEDVDFESENDGQL
KLC
NT seq 1452 nt   +upstreamnt  +downstreamnt
gtgaacgaatcgccccaactctatttattggatggttccagttatatctatcgtgcctac
tacggtatccgcgatgttgccaccgccgatggtacgccaaccaatgccgtttacggtttt
acgcgcatgctgctgggactgttgcaggaacaccgccccgattacctggctgtggtcttt
gataggcccagagaagaaactttccgccgggaaatctatcccgaatataaagcacatcgg
gaggccatgcccgaagaccttccgccgcagattgctgcgatccggcaggttttgcaggct
ttgcagattccatccctggaagcgcccggattcgaggcagacgatgttattgccactttg
gcccgccgctacgccgccgaaggcatcgaggtcacggtggtcaccggcgacaaggatttg
atgcagattgttgatgataaaattttcctgctcgacaccatgaaggatacgcgatccgga
ccgaaggaggttctggaacgtttcggggtcccccccgaactggtcgccgatgttttgggc
ctggctggagacacctcggacaatatcccgggtgttcccggcatcggcgagaaaaccgcc
gcggagctggtgcagcgcttcggcagcctggaagatgtccttaagtggaccaatctcgtg
aacggcagaaaacgtcgggaaaatttacaagctcacgccgatcaggctcggttgtccaaa
accctggcaaccctcagagatgacgtgccccttgaaagctctctggtcgaattggagcga
cagtcgccgaatctgacggacttgatccctctgctgcggcagttggaattcgaagctctg
gagattgtcttcactccgccgccaccgggggtggtggaaatctacagcgacggctcgggt
cgggactcgggaccggggggctacggtgtggtcctgcgctatggcgagcatgaaaaggag
ctcagcggctttgaacccgtggcgacgtcgcagcgtatggagttgatcgccgcgatacga
ggtctggaagccctgaataaaccgcagacggttcgattgtacagcgattcccagtacctg
gtgcggggcatgagcgactggattgacggctgggttcgcgatggtcgcctcgagacaccg
ggcgctctggccaaccaggacctctggcaacagcttttggccctttctcggcaacataag
attcactgggaatgggtacgaggccatgccggacatccctttaatgaacgttgcgacaag
ctggccaagcgggctgctgaagagggtgtgcaggcagcgggagcagatcgggatcaggga
gcagtgccggaagaggaagtcgcagagccggtcgctcctgtttcgctggcagcgctccgt
ttggaaccgagcctggtcgaggaagacgttgattttgaatccgaaaatgatggtcagttg
aagctttgctag

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