Syntrophotalea acetylenivorans: A7E78_09935
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Entry
A7E78_09935 CDS
T04594
Name
(GenBank) ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
pef
Syntrophotalea acetylenivorans
Pathway
pef03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7E78_09935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pef03032
]
A7E78_09935
Enzymes [BR:
pef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
A7E78_09935
DNA replication proteins [BR:
pef03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
A7E78_09935
Prokaryotic type
Elongation factors (bacterial)
RNase H
A7E78_09935
Elongation factors (archaeal)
A7E78_09935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_3_exonuc_N
RNase_H
5_3_exonuc
HHH_2
HHH_5
DNA_pol_lambd_f
TopoV_HHH
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
APG28134
UniProt:
A0A1L3GQD2
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All DBs
Position
complement(2189654..2191105)
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AA seq
483 aa
AA seq
DB search
MNESPQLYLLDGSSYIYRAYYGIRDVATADGTPTNAVYGFTRMLLGLLQEHRPDYLAVVF
DRPREETFRREIYPEYKAHREAMPEDLPPQIAAIRQVLQALQIPSLEAPGFEADDVIATL
ARRYAAEGIEVTVVTGDKDLMQIVDDKIFLLDTMKDTRSGPKEVLERFGVPPELVADVLG
LAGDTSDNIPGVPGIGEKTAAELVQRFGSLEDVLKWTNLVNGRKRRENLQAHADQARLSK
TLATLRDDVPLESSLVELERQSPNLTDLIPLLRQLEFEALEIVFTPPPPGVVEIYSDGSG
RDSGPGGYGVVLRYGEHEKELSGFEPVATSQRMELIAAIRGLEALNKPQTVRLYSDSQYL
VRGMSDWIDGWVRDGRLETPGALANQDLWQQLLALSRQHKIHWEWVRGHAGHPFNERCDK
LAKRAAEEGVQAAGADRDQGAVPEEEVAEPVAPVSLAALRLEPSLVEEDVDFESENDGQL
KLC
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaatcgccccaactctatttattggatggttccagttatatctatcgtgcctac
tacggtatccgcgatgttgccaccgccgatggtacgccaaccaatgccgtttacggtttt
acgcgcatgctgctgggactgttgcaggaacaccgccccgattacctggctgtggtcttt
gataggcccagagaagaaactttccgccgggaaatctatcccgaatataaagcacatcgg
gaggccatgcccgaagaccttccgccgcagattgctgcgatccggcaggttttgcaggct
ttgcagattccatccctggaagcgcccggattcgaggcagacgatgttattgccactttg
gcccgccgctacgccgccgaaggcatcgaggtcacggtggtcaccggcgacaaggatttg
atgcagattgttgatgataaaattttcctgctcgacaccatgaaggatacgcgatccgga
ccgaaggaggttctggaacgtttcggggtcccccccgaactggtcgccgatgttttgggc
ctggctggagacacctcggacaatatcccgggtgttcccggcatcggcgagaaaaccgcc
gcggagctggtgcagcgcttcggcagcctggaagatgtccttaagtggaccaatctcgtg
aacggcagaaaacgtcgggaaaatttacaagctcacgccgatcaggctcggttgtccaaa
accctggcaaccctcagagatgacgtgccccttgaaagctctctggtcgaattggagcga
cagtcgccgaatctgacggacttgatccctctgctgcggcagttggaattcgaagctctg
gagattgtcttcactccgccgccaccgggggtggtggaaatctacagcgacggctcgggt
cgggactcgggaccggggggctacggtgtggtcctgcgctatggcgagcatgaaaaggag
ctcagcggctttgaacccgtggcgacgtcgcagcgtatggagttgatcgccgcgatacga
ggtctggaagccctgaataaaccgcagacggttcgattgtacagcgattcccagtacctg
gtgcggggcatgagcgactggattgacggctgggttcgcgatggtcgcctcgagacaccg
ggcgctctggccaaccaggacctctggcaacagcttttggccctttctcggcaacataag
attcactgggaatgggtacgaggccatgccggacatccctttaatgaacgttgcgacaag
ctggccaagcgggctgctgaagagggtgtgcaggcagcgggagcagatcgggatcaggga
gcagtgccggaagaggaagtcgcagagccggtcgctcctgtttcgctggcagcgctccgt
ttggaaccgagcctggtcgaggaagacgttgattttgaatccgaaaatgatggtcagttg
aagctttgctag
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