Syntrophotalea acetylenivorans: A7E78_11925
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Entry
A7E78_11925 CDS
T04594
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pef
Syntrophotalea acetylenivorans
Brite
KEGG Orthology (KO) [BR:
pef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pef03016
]
A7E78_11925
Enzymes [BR:
pef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A7E78_11925
Transfer RNA biogenesis [BR:
pef03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A7E78_11925
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
APG28488
UniProt:
A0A1L3GS49
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Position
2636295..2637419
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AA seq
374 aa
AA seq
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MPLPPILVDPSALSEFAAQLHREPVIAVDLEADSLHSYQDKVCLLQFSTPTATVLVDPLA
IGDLSSLKAVLADGAVRKVFHAADYDIRCLYRDFGIEINGLFDTMIACQFLGEEKVGLAD
ILNKYFDVQLDKRYQRADWSKRPLEEGMVRYAAEDTRYLLQLTEQLEAQLVAKGRLAWAQ
EEFVLLEQVRHNSTDGPLFLRFKKANTLERRQLAVLEELLQWRDSEAKRRDCPPFKVLNN
APLLEVARSMPANVRALSKVEGMVPRLVGRYGGSLLSAVEEGLKVPEEELPVYPRGEPRQ
RDPEAEARVLLLKKWRSKISKELEMDPGIVINNASLEQIARRQPNCVEDLAELKAMKNWQ
RQVLGKGIVAALKT
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgccccccattctggtcgacccttcggccctgtctgagtttgccgcgcaattg
caccgggaaccggtcatcgccgtcgatcttgaggccgactccctgcattcctatcaagac
aaggtctgcctgctgcaattttccacccccaccgccacggtgttggtcgatcccttagct
atcggtgatttgtcgtccctgaaggcagtgctggccgacggggcggtgcgcaaggtcttt
catgccgctgactacgatattcgctgtctgtatcgcgattttggaatcgagattaacggg
ttgttcgataccatgattgcctgccagttccttggagaagagaaagtcggtctggccgat
atcctcaataaatattttgatgtccaactcgataagcgctaccagcgtgccgattggtcg
aagcgccctctggaggaggggatggtccggtacgccgccgaggatacccgttatctgttg
cagctgaccgagcagctcgaggcccagttggttgccaagggtcggttagcatgggcccag
gaggaatttgtcctccttgaacaggtgcgccacaacagcacggacgggccgttgtttctc
cgttttaaaaaggccaacaccctggaacgtcgccagttggcggttctggaggaactgttg
caatggcgtgacagcgaggcgaagcgaagggattgtccacccttcaaggtgttgaacaac
gccccgctgctggaggtggctcgaagtatgcctgcgaatgtgcgcgccttgtctaaagtc
gaaggcatggttccccgactggtcggtcgttacggcgggtcgttgctgtcagcggtggaa
gagggccttaaggtgccggaggaagaactgccagtctatcctcggggtgagccgcgtcag
cgggaccccgaggctgaggcgcgggtgttgttgctcaagaagtggcggtcgaaaatttct
aaagagttggaaatggaccccggcatagttatcaacaacgcctcgctggagcaaatcgcg
cggcgccagccgaattgcgtagaggacttggcagaattgaaggccatgaagaactggcag
cgccaggttctgggaaaaggaatagtcgctgcgttgaagacctga
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