KEGG   Syntrophotalea acetylenivorans: A7E78_11925
Entry
A7E78_11925       CDS       T04594                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pef  Syntrophotalea acetylenivorans
Brite
KEGG Orthology (KO) [BR:pef00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pef03016]
    A7E78_11925
Enzymes [BR:pef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     A7E78_11925
Transfer RNA biogenesis [BR:pef03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    A7E78_11925
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC DNA_pol_A_exoN
Other DBs
NCBI-ProteinID: APG28488
UniProt: A0A1L3GS49
LinkDB
Position
2636295..2637419
AA seq 374 aa
MPLPPILVDPSALSEFAAQLHREPVIAVDLEADSLHSYQDKVCLLQFSTPTATVLVDPLA
IGDLSSLKAVLADGAVRKVFHAADYDIRCLYRDFGIEINGLFDTMIACQFLGEEKVGLAD
ILNKYFDVQLDKRYQRADWSKRPLEEGMVRYAAEDTRYLLQLTEQLEAQLVAKGRLAWAQ
EEFVLLEQVRHNSTDGPLFLRFKKANTLERRQLAVLEELLQWRDSEAKRRDCPPFKVLNN
APLLEVARSMPANVRALSKVEGMVPRLVGRYGGSLLSAVEEGLKVPEEELPVYPRGEPRQ
RDPEAEARVLLLKKWRSKISKELEMDPGIVINNASLEQIARRQPNCVEDLAELKAMKNWQ
RQVLGKGIVAALKT
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgcccctgccccccattctggtcgacccttcggccctgtctgagtttgccgcgcaattg
caccgggaaccggtcatcgccgtcgatcttgaggccgactccctgcattcctatcaagac
aaggtctgcctgctgcaattttccacccccaccgccacggtgttggtcgatcccttagct
atcggtgatttgtcgtccctgaaggcagtgctggccgacggggcggtgcgcaaggtcttt
catgccgctgactacgatattcgctgtctgtatcgcgattttggaatcgagattaacggg
ttgttcgataccatgattgcctgccagttccttggagaagagaaagtcggtctggccgat
atcctcaataaatattttgatgtccaactcgataagcgctaccagcgtgccgattggtcg
aagcgccctctggaggaggggatggtccggtacgccgccgaggatacccgttatctgttg
cagctgaccgagcagctcgaggcccagttggttgccaagggtcggttagcatgggcccag
gaggaatttgtcctccttgaacaggtgcgccacaacagcacggacgggccgttgtttctc
cgttttaaaaaggccaacaccctggaacgtcgccagttggcggttctggaggaactgttg
caatggcgtgacagcgaggcgaagcgaagggattgtccacccttcaaggtgttgaacaac
gccccgctgctggaggtggctcgaagtatgcctgcgaatgtgcgcgccttgtctaaagtc
gaaggcatggttccccgactggtcggtcgttacggcgggtcgttgctgtcagcggtggaa
gagggccttaaggtgccggaggaagaactgccagtctatcctcggggtgagccgcgtcag
cgggaccccgaggctgaggcgcgggtgttgttgctcaagaagtggcggtcgaaaatttct
aaagagttggaaatggaccccggcatagttatcaacaacgcctcgctggagcaaatcgcg
cggcgccagccgaattgcgtagaggacttggcagaattgaaggccatgaagaactggcag
cgccaggttctgggaaaaggaatagtcgctgcgttgaagacctga

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