KEGG   Syntrophotalea acetylenivorans: A7E78_12790
Entry
A7E78_12790       CDS       T04594                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pef  Syntrophotalea acetylenivorans
Pathway
pef03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pef00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A7E78_12790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pef03019]
    A7E78_12790
Messenger RNA biogenesis [BR:pef03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A7E78_12790
SSDB
Motif
Pfam: RNase_Y_N HD HDOD KH_1 KH_KhpA-B KH-I_KHDC4-BBP KH_2 Propep_M14
Other DBs
NCBI-ProteinID: APG28644
UniProt: A0A1L3GRS3
LinkDB
Position
2828030..2829592
AA seq 520 aa
MSIEIVFLLVGVAVVAGAVIGTILRNRISGSQVAAAKQTASQILTEADKEADIVRKEAAI
QAKDALLAAKAEWEGEAKEMRRELQAQEKRLLQREENIDRKMTQLEEREGALSRREKHLG
GQEDRVKELESEVDKLIAEQTRRLEGLSGLSAEEARQQLMANMESQARHDCAKRIKQIED
EARETADKKAKEVLALAVQRYAGDYVAEKAVSVVALPSDEMKGRIIGREGRNIRAIEAAT
GIDLIIDDTPEAVIISGFNPVRREVARISLERLITDGRIHPARIEEVVQKATEEVDNSIR
EAGEQATFDVGVHGIHPEVIKLVGRLKYRTSYGQNVLQHSIEVAFLCGIMAAELGINVKQ
AKRAGLLHDIGKAVDHEIEGSHAVIGADLARKYGESPKVVHALAAHHEDEKPSTVLAVLV
QAADALSGARPGARREMLETYVKRLADLERIGTSFKGVTSCFAIQAGREIRVMVASDKVS
DVESHVLAKDIAHKVEGEMTYPGQIKVNVIRETRAVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
ttgagtatagagattgtgtttttattggtcggtgtcgccgtcgttgcaggagccgtgatc
gggacgattctgcgtaatagaatttccgggtctcaggtcgccgcagccaagcagacggcc
agtcaaattctgaccgaggcggataaggaagcggatattgttcgcaaggaagcggctatt
caagcgaaagacgccctccttgcagccaaggctgagtgggaaggtgaagccaaggagatg
cgccgcgagctgcaagctcaggagaaacggctactgcagcgtgaagaaaatattgatcgg
aaaatgacccagcttgaggagcgcgaaggagcgttgagccggcgtgaaaagcatcttggt
ggccaggaagaccgggtcaaggagctggaatcggaggttgataagctgatcgctgagcag
acaaggcgcctggagggtttgtccggacttagcgccgaagaagccaggcaacagctcatg
gccaacatggagagtcaggctcgtcatgactgtgccaagcgcatcaagcagatcgaagat
gaagcccgtgaaactgccgacaagaaagccaaagaagttttggcgctggcggtacagcgt
tacgccggcgactacgtggccgaaaaggcggtcagcgtggtggctctgccctcggacgaa
atgaaagggcgaatcatcggccgcgaaggtcggaacattcgtgctattgaagcggcaacc
ggtatcgacctgattatcgacgatacgcccgaggcggtgattatctccggtttcaacccg
gtgcggcgtgaagtggcgcgtatctctttggagcgcttgatcacagatggccgtattcat
cctgcccgtatcgaggaagttgttcagaaggctaccgaggaggtagataactccattcgt
gaggcgggagaacaggcgaccttcgacgttggcgtacatggtatccatcccgaagtgatc
aagcttgttggccgcctcaagtatcgcacctcctatggccagaacgttctgcagcactcc
atcgaggtagcctttttgtgcggcatcatggctgctgagttgggtatcaatgttaaacag
gccaagcgagccgggctgctgcacgatatcggcaaggccgtcgatcatgagatcgaaggt
tcccacgcggttatcggtgccgacctggcccgtaaatacggtgagtcgcctaaggtggtc
catgccctggccgcccaccatgaagatgaaaagccttctaccgtgttggcggtattggta
caggctgccgatgctctttccggagcgcgccccggagcgcggcgtgagatgctggaaacc
tacgttaagcgccttgctgacctggagcgtatcgggacctcctttaaaggcgtcaccagt
tgtttcgctattcaggccggtcgggaaatacgggtcatggtcgccagcgacaaggtttcc
gatgtggagtctcatgttctggccaaggatatcgcccataaggtcgaaggcgaaatgact
tatcccgggcagattaaagtcaacgtgatccgtgagactcgggccgtcgaatacgccaag
tag

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