Candidatus Pelagibacter giovannonii: E5R92_00100
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Entry
E5R92_00100 CDS
T06537
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E5R92_00100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peg03021
]
E5R92_00100
03400 DNA repair and recombination proteins [BR:
peg03400
]
E5R92_00100
Enzymes [BR:
peg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E5R92_00100
Transcription machinery [BR:
peg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E5R92_00100
DNA repair and recombination proteins [BR:
peg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E5R92_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QIZ20199
UniProt:
A0A6H1Q244
LinkDB
All DBs
Position
15375..15902
Genome browser
AA seq
175 aa
AA seq
DB search
MARVTVEDCIDKVDSPYELVLVAKERAVQLNSGLEPTLDRDNDKNTVISLREIAADTIKV
SDLTDSAIHKLRKHVEQVDDGTDDDEIIGDDFESMYKGEISKSGTPILPSKRARKIPEKI
QVAPEDLEELTAKAEPEVEVNPELEVASEETEVSLDQIAETETTEDSSEETEPNS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggctagagtaacagtagaagattgcattgataaagtagatagtccttatgaattagta
ttggttgctaaagaaagagcagttcaattaaattcaggattggagcctacactcgataga
gataatgacaaaaatacagttatatctctaagagaaattgcagctgacactattaaagtt
tcagatttaacagatagcgctattcataaacttagaaaacacgttgaacaagttgatgat
ggtactgatgatgatgaaattattggtgatgattttgaaagtatgtacaaaggtgaaatt
tctaaaagtggaacacctattttaccatctaaaagagctagaaaaattccagaaaaaatt
caagttgcaccagaagatttagaagaattaactgcaaaagccgaacctgaagtagaagtt
aatccagaacttgaagttgctagtgaagaaactgaagtttctttagatcaaatagctgaa
actgaaactacagaagatagctcagaagaaactgaacctaatagttaa
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