Candidatus Pelagibacter giovannonii: E5R92_00775
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Entry
E5R92_00775 CDS
T06537
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
peg
Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E5R92_00775 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peg03019
]
E5R92_00775 (rnc)
03009 Ribosome biogenesis [BR:
peg03009
]
E5R92_00775 (rnc)
03036 Chromosome and associated proteins [BR:
peg03036
]
E5R92_00775 (rnc)
Enzymes [BR:
peg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
E5R92_00775 (rnc)
Messenger RNA biogenesis [BR:
peg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E5R92_00775 (rnc)
Ribosome biogenesis [BR:
peg03009
]
Eukaryotic type
90S particles
RNase
E5R92_00775 (rnc)
Prokaryotic type
rRNA processing factors
E5R92_00775 (rnc)
Chromosome and associated proteins [BR:
peg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
E5R92_00775 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QIZ20326
UniProt:
A0A6H1Q0V6
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All DBs
Position
129022..129690
Genome browser
AA seq
222 aa
AA seq
DB search
MKTNPTTLEKKLKLKFSNQKIFFKSLTHKSFDSINNNEKIEFLGDRVLGLIIAKKLLELY
PEEREGVLDKKFASLVNKKKCLEIAKKIELEKYILVLNPKNKKIEIEDKIVADCLEALIG
AIYLDKGLNFTEKFILNLWSDHITASVITQIDAKTKLQEYSLKIFKVLPIYKLISNTGPR
HKPLFKVAVKLKNTRFFTAEGTSKKDAEQNAASLCFEDVLKK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaaccccacaacactagaaaagaaattaaaattaaagttttcaaatcaaaaa
atcttttttaaaagcttaacacacaaaagttttgattcaataaacaataatgaaaagatt
gaattcttaggagatagggttttaggtcttattattgcaaaaaaattattagaactttat
ccagaagaaagagaaggggtattagataaaaaatttgcttcattagtaaataaaaaaaaa
tgtttagaaattgctaaaaaaattgaactagaaaaatatattttagttttaaaccctaaa
aataaaaaaattgaaattgaagataaaatagtagcagactgtttagaggctttaattgga
gcgatttatcttgataaaggtttaaatttcactgaaaaatttattcttaatttatggagt
gaccatattacagcgagtgttataacccaaattgatgcaaagacaaaactccaagaatac
tcacttaaaatttttaaagtgctgcctatttataagctaatatctaatactgggcctcga
cacaaaccactctttaaagttgctgttaaattaaaaaatactagatttttcacagcagag
ggaacttctaaaaaagacgcagaacagaatgctgcatctttatgttttgaggatgtttta
aaaaaatga
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