Candidatus Pelagibacter giovannonii: E5R92_00780
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Entry
E5R92_00780 CDS
T06537
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E5R92_00780 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peg03400
]
E5R92_00780 (recO)
DNA repair and recombination proteins [BR:
peg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E5R92_00780 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E5R92_00780 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QIZ20327
UniProt:
A0A6H1Q096
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All DBs
Position
129687..130367
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AA seq
226 aa
AA seq
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MNWDDSAYLVSKNRYSENSIIAEVFTENHGKISGIIFGGTSKKIKNYLQIGNKIYVNYNS
KSVTRIGYFKIEILKALTPLYFDENQKLSCITSAMHLIKLLTAEAQSNKEIFKLIDKFFE
ILTSDNWIKRYIFWELELLKLLGYDLELKTMAEKEIVDNEVNYYVKSSTEKKSIPNFLID
ENNIDVNLKNLLNGLKLVSDYLEKSILKPNNLNLPTSRTHFINLLK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaattgggacgatagcgcttatttagtttctaaaaatagatacagcgaaaactcaata
attgcagaagtttttacagaaaaccatggaaaaatctcaggaataatttttggtggaact
tcaaaaaaaatcaaaaactatttgcaaattggtaataaaatctatgtaaactataattct
aaaagtgttactagaattggttattttaaaatagaaattttaaaagctttaacaccactc
tattttgatgaaaatcaaaaactatcatgcataacctcggcaatgcatcttataaaactt
cttactgctgaagctcaatctaataaagaaatttttaaattaattgataaattttttgaa
atattaacttctgataattggataaaaagatatattttctgggagttagaacttttaaaa
ttattgggatatgatttggaattaaaaactatggctgaaaaagaaattgttgataatgaa
gtgaattattatgtcaaatcttcaaccgaaaaaaaaagtattccaaattttttaatagat
gaaaataatattgatgttaatttaaaaaatttactcaatggtctaaagcttgttagtgat
tatcttgaaaaaagtattttaaaaccaaataatttaaatcttcctacttctaggactcat
tttattaatcttttaaaataa
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