Candidatus Pelagibacter giovannonii: E5R92_01900
Help
Entry
E5R92_01900 CDS
T06537
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
peg
Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peg03032
]
E5R92_01900
03036 Chromosome and associated proteins [BR:
peg03036
]
E5R92_01900
03400 DNA repair and recombination proteins [BR:
peg03400
]
E5R92_01900
DNA replication proteins [BR:
peg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E5R92_01900
Chromosome and associated proteins [BR:
peg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E5R92_01900
DNA repair and recombination proteins [BR:
peg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E5R92_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CshA_repeat
DUF2529
Motif
Other DBs
NCBI-ProteinID:
QIZ20538
UniProt:
A0A6H1Q142
LinkDB
All DBs
Position
complement(333997..334272)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKKQLIAQLSGSLNLSKADAERTFDTITNTILDALKGDDTVKIAGFGTYKVAKRKARVG
RNPRTGEQIQIGASQKVKFLPAKALKEIFNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaacaattaatagcgcaactttcgggttctttaaacctaagtaaagctgac
gctgagcgtacttttgatactattacaaacactattctagatgctttaaaaggtgacgat
acagtgaaaattgctggatttggaacttacaaagtagcaaaaagaaaagctagagttgga
agaaaccctagaactggagaacaaattcaaatcggtgcttctcaaaaagttaagttttta
ccagctaaagcacttaaagaaatatttaataagtaa
DBGET
integrated database retrieval system