KEGG   Candidatus Pelagibacter giovannonii: E5R92_01900
Entry
E5R92_01900       CDS       T06537                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
peg  Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:peg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:peg03032]
    E5R92_01900
   03036 Chromosome and associated proteins [BR:peg03036]
    E5R92_01900
   03400 DNA repair and recombination proteins [BR:peg03400]
    E5R92_01900
DNA replication proteins [BR:peg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    E5R92_01900
Chromosome and associated proteins [BR:peg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    E5R92_01900
DNA repair and recombination proteins [BR:peg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      E5R92_01900
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG CshA_repeat DUF2529
Other DBs
NCBI-ProteinID: QIZ20538
UniProt: A0A6H1Q142
LinkDB
Position
complement(333997..334272)
AA seq 91 aa
MNKKQLIAQLSGSLNLSKADAERTFDTITNTILDALKGDDTVKIAGFGTYKVAKRKARVG
RNPRTGEQIQIGASQKVKFLPAKALKEIFNK
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaaaaaacaattaatagcgcaactttcgggttctttaaacctaagtaaagctgac
gctgagcgtacttttgatactattacaaacactattctagatgctttaaaaggtgacgat
acagtgaaaattgctggatttggaacttacaaagtagcaaaaagaaaagctagagttgga
agaaaccctagaactggagaacaaattcaaatcggtgcttctcaaaaagttaagttttta
ccagctaaagcacttaaagaaatatttaataagtaa

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