Candidatus Pelagibacter giovannonii: E5R92_02680
Help
Entry
E5R92_02680 CDS
T06537
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00630
Glyoxylate and dicarboxylate metabolism
peg00680
Methane metabolism
peg01100
Metabolic pathways
peg01120
Microbial metabolism in diverse environments
peg01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E5R92_02680
09102 Energy metabolism
00680 Methane metabolism
E5R92_02680
Enzymes [BR:
peg01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
E5R92_02680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_9
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer2_4
Fer4_8
Fer4_2
Fer4_6
Fer4_22
Fer4_15
Fer4_16
Fer4_18
TPP_enzyme_M
DUF6554
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
QIZ20691
UniProt:
A0A6H1Q1M9
LinkDB
All DBs
Position
477178..479946
Genome browser
AA seq
922 aa
AA seq
DB search
MSSEKRKIAYIDGKPYEIGPNHTSVLKFVESYLGEKKVPALCNDPNLAPYGACRVCSVEI
ALVKDGPTKVVASCHTPVGENQHIFTNNENLTALRKNIVELVLTDHPMECGTCEVNNNCE
LQDVANDLGISDHRYNVPKQHKGIPRDTSHDYMRMNLDNCINCGRCVRACDEIQGSFVLT
MSGRGFESKITTDNDALFGDSSCVSCGACAHTCPTDAISDVYQSKSVAVDEKVRTTCSYC
GVGCNLEASIKDNKVVAISTPKESEVNAGHTCIKGRYAFGFYDHPDRLKTPLIKRNGKFE
EASWDEAYDFIKKELNRITKANGPDAVAGISSARCTNEENYVFQKMIRAAIGTNNIDCCA
RICHSPTAWGMQQTFGTGAATNSTEDIYHADLFMVIGANPTNAHPVTGAKIKQQVMKGKK
LIVLDPITTELAKLADYHIKLRPGTNVAILNMMLHYILKANLYDKDFVRDRTEGFANFIK
EIERQDMDHLAKVAGVDKQLVKEAAIAYATAKNSMEFHGLGVTEQEQGSKTVMLIADLAM
ITGNIGRRGVGVNPLRGQNNVQGAADMGCQPHQGAGYFEVADEKVQNFYTEKYGVVHPTK
QGLKIPEMFDGAINKDVKAVWIIGEDIVQTDPNSAHVIDAMNSLELLVVQEIFMSETAKL
ATVVLPGTTFLEKNGTFTNTERRIQRVNRAVPPLPGTKTDGTIVTDMMQKLGFDQPEYDA
DQVLAEIADVVPFFKGVTRERLGKMGLQWPVQEDGTDTQILHQETFKLGKGQLKNFDWKE
SNEIAENKKDYPLILTTSRVLQHYNAATMTRRTKNINIVSEDLLLVHPNDAKKRELNTGD
IGRLYSGRGEVALKVEVTDKVKEGIVFTTFHFPEHMVNMVTGHGKDEETMCAEYKVSSVE
IQKISNQFKTVVEPKENQAELS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagaaaaaagaaaaattgcatatatagatggtaagccatatgaaattggtcct
aaccatacttctgttttaaaatttgtagaaagctatcttggtgaaaaaaaggttcctgct
ttatgtaacgatccaaacttagcaccttatggagcttgtagagtttgttcggttgagatt
gctttagttaaagatggtccaactaaagttgtagcctcatgtcatacaccggtaggtgaa
aaccaacatatttttacaaacaatgaaaatttaacggctttaagaaaaaatattgttgaa
ctagttttaaccgaccatccaatggagtgtggaacttgtgaggttaataataactgtgaa
cttcaagatgttgctaatgatttaggcatctcagatcatagatataatgttccaaaacaa
cataaaggtattccaagagacacctctcatgattacatgagaatgaatttggataactgc
attaattgtggaagatgtgtcagagcttgtgatgaaattcaaggttcatttgttttaaca
atgagtggaagaggatttgagtctaagattacaacagacaatgatgcattatttggtgac
tcgtcttgtgtatcttgtggagcttgtgcacacacttgcccaacagatgccatctcagat
gtatatcaatctaaatcagttgctgttgatgaaaaagtaagaacaacttgttcttattgt
ggagttggttgtaatttagaggcttcaattaaagataataaagttgttgcaatttctact
cctaaagaatctgaagttaacgcaggtcacacttgtattaaaggaagatatgcttttgga
ttttatgatcatcctgacagattaaaaactcctttaattaaaaggaatggaaagtttgaa
gaagcatcatgggatgaggcatatgattttattaaaaaagaattaaatagaattaccaaa
gctaatggaccagatgcagttgcaggtatttcttcagcaagatgtactaatgaagaaaat
tatgttttccaaaaaatgattagagcagcaataggaactaataatattgattgctgtgca
agaatttgtcattcacctacggcgtggggaatgcaacaaacatttggaactggagcagct
acaaattctacagaagatatttaccatgcagatttatttatggtgatcggagcaaatcca
acaaatgctcaccctgttactggtgctaaaattaagcaacaagtaatgaagggtaaaaaa
ttaattgtattagatccaattactactgagcttgctaaacttgctgattatcatattaaa
cttagaccaggaacaaatgtagccatattaaatatgatgttgcattatatattgaaagca
aacctttatgacaaagactttgtcagagatagaactgaaggttttgcaaatttcattaaa
gaaattgagagacaagatatggatcatttagcaaaagttgctggtgttgataaacagtta
gttaaagaagctgcaattgcttatgcaacagctaaaaactccatggaattccatggttta
ggtgttacagaacaagagcaaggatctaaaacggtaatgttaattgctgatcttgccatg
attacaggaaatattggtagaagaggtgttggtgttaatccattgagaggacaaaataat
gttcaaggtgcagctgatatgggctgtcaaccccatcaaggagctggttactttgaagtg
gctgatgaaaaagttcaaaatttctacactgaaaaatatggagtagtacacccaacaaaa
caaggactaaaaattccagaaatgtttgatggggcaattaataaagatgtgaaagctgtc
tggatcattggagaagacatagttcaaacagatcctaatagtgcccacgtaatagatgct
atgaattcacttgagctattagttgtacaagaaatttttatgagtgagacagcaaaactt
gcgacagtagtattacctggaacaactttcttagaaaaaaatggaacttttactaataca
gaaagaagaattcaaagagttaaccgagccgtacctcctttacctggtacaaaaacagat
ggaacaattgtaacagacatgatgcaaaaattaggctttgatcaacctgaatatgatgct
gatcaagttcttgcagaaatagctgacgtggttcctttctttaaaggtgtaacaagagaa
agacttggtaaaatgggattacagtggccagtacaagaagatggaacagatactcaaatt
ttacaccaagaaacatttaaattaggaaaaggacaacttaaaaatttcgattggaaagaa
tctaatgagatagctgagaataaaaaagattatccattaattttaacaactagtagagtt
cttcaacattataatgctgctactatgacaagacgtactaaaaatattaatatagtttct
gaagatttattactagttcaccctaatgatgctaaaaaaagagaattaaatactggtgat
attggtagactttattctggcagaggtgaggtagctttaaaagttgaggttactgataaa
gttaaagaaggaattgtatttacaacattccacttcccagaacatatggttaacatggta
actggtcatggaaaagatgaagagacaatgtgtgcagaatacaaagtttcttctgtagaa
attcaaaagatatccaatcaatttaaaactgttgttgagcctaaagaaaatcaagcagaa
ctttcataa
DBGET
integrated database retrieval system
