Candidatus Pelagibacter giovannonii: E5R92_02730
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Entry
E5R92_02730 CDS
T06537
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00260
Glycine, serine and threonine metabolism
peg00630
Glyoxylate and dicarboxylate metabolism
peg00670
One carbon pool by folate
peg00785
Lipoic acid metabolism
peg01100
Metabolic pathways
peg01110
Biosynthesis of secondary metabolites
peg01200
Carbon metabolism
Module
peg_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E5R92_02730 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E5R92_02730 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
E5R92_02730 (gcvP)
00670 One carbon pool by folate
E5R92_02730 (gcvP)
Enzymes [BR:
peg01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
E5R92_02730 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Pyridoxal_deC
SidM_Rab1-act
Motif
Other DBs
NCBI-ProteinID:
QIZ20700
UniProt:
A0A6H1Q2G9
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All DBs
Position
complement(488165..491023)
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AA seq
952 aa
AA seq
DB search
MLKNAQKDFIQRHIGPSVDEQNVMLKELGYQNLDDLIKDTVPEKILLKDDLDIGDPNSEY
KALRKLKDISKKNKIYSSFIGMGYYGTYTPYVILRNILENPGWYTSYTPYQPEVAQGRLE
MLLNFQQMIIDFTGMDIANASLLDEGTAAAEAMGLSYRISKSESKKVFVSKNCHPQTIDV
IKTRAEPLGLEIIVGDEDKDIKEDIICGIIQYPGTLGDIKDPSEAISKIHKHNGKAVLAC
DLLALAKLKTPAELGADIAVGSSQRFGIPMGYGGPHAAFFATKDEYKRSMPGRIVGVSVD
KHGKKAYRLALQTREQHIRRDKATSNICTAQALLAIVSAAYAVYHGPQGIKKIAESVSQL
TKNFADKLKQSGYELYSNDFFDTVTIKTLDKTEKIYKNALDQGVNIRKVNSEMLAVSFDE
RKNLYRANQLLKIFNCSETIKESMNESLSNIPKNLLRTSTYLDHPVFNRYHSETEMLRYL
KKLEDSDIALNKSMIALGSCTMKLNAVSEMIPVTWKEFSQPHPFSPVEQMDGYRELFTDL
KNWLRSITGFSGVSLQPNAGAQGEFAGLMVIRKFHEKNGETNRNVCLIPSSAHGTNPASA
QMVGMKVVVVKCDQHGNVDYEDLKNKAEEHSENLAALMVTYPSTHGVFEEKITDICELIH
NHGGQVYMDGANLNALVGIAKPGNFGPDVCHINLHKTFCIPHGGGGPGMGPIACKKHLEI
FLPKHSVIKDCGPVTGMGAVSAAPWGSSSILSISWMYIKMMGSEGLRKASQVAILNANYI
AHKLKDSFPILYKGKSGNVAHECIIDIRTIKSETGITEEDIAKRLIDFGYHAPTMSWPVA
GTMMIEPTESESLSEIDKFCSTLIKIKQEIDKIQSGEYDKTDNPLKNAPHTHVELTSNKW
DHKYEREEAAYPSEFLRTNKYWPPVGRVDNVYGDKNLFCTCPSMEEYEDTAA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaatgctcaaaaagattttatacaaagacacataggtccatctgttgatgaa
caaaatgttatgcttaaagagttgggctatcaaaatcttgatgatttaataaaagatact
gtaccagaaaaaattcttctcaaagatgatttagatattggtgatccaaactctgaatat
aaagcacttagaaaattaaaagatatttctaaaaaaaataagatttattctagctttata
ggaatgggttattatggaacttatactccctatgtaatacttagaaatattttagaaaat
ccaggatggtatacttcttatactccctaccagccagaagtagcacaaggaagattggaa
atgttattaaattttcaacaaatgataattgactttacgggaatggatattgctaatgcc
tctcttttagatgaaggaacagcagcagcagaagctatgggattaagctatagaatatct
aagtctgaatctaaaaaagtttttgtttcaaaaaattgtcaccctcaaactattgatgtt
attaaaacaagagctgaacctttaggtttagaaataatagttggtgacgaagataaagat
attaaagaagatattatatgtggtattattcaataccctggcacccttggagatataaaa
gacccaagtgaggctattagtaaaatacataaacataatggaaaagcagttcttgcatgt
gatttgttagcacttgctaaactaaaaacacctgctgagttaggtgctgatattgcagtc
ggtagttcacaacgttttggaattccaatgggttatggtggcccgcacgcagcatttttt
gctacaaaagatgagtataaaagatcaatgccaggtagaatagttggcgtttcagtagat
aagcatggaaaaaaagcatacagacttgcacttcaaacaagagagcagcatataagaaga
gataaagccacgagtaatatttgtaccgcacaagcattattagcaatagtctctgcagct
tatgctgtctatcacggtccacaaggtattaaaaagattgcagaaagtgtttctcaactg
actaaaaattttgcagataaactaaaacaatctggttatgaactttattcaaatgatttt
tttgatacggtaacaataaaaactctagataaaacagagaagatatataaaaatgcttta
gatcaaggagtaaatatcagaaaagtaaattctgaaatgttagcagtgtcttttgatgaa
agaaaaaatctttatagagcaaatcaattattaaaaatttttaattgttcagaaacaatt
aaagaatctatgaatgaaagtttgtctaatattcctaaaaatttattaagaacttcaact
tatttagatcatccagtttttaatagataccattcagaaacagaaatgctacgttatcta
aaaaaattagaagactctgacattgccctaaataaatccatgattgctttaggctcgtgc
actatgaagcttaatgcagtttcagaaatgataccagttacttggaaagaattttcacag
ccacatcctttttctcctgtagagcaaatggatggttatagggaattatttacagattta
aaaaactggttgagatcaattactggattttctggagtttcattgcaaccaaatgctggt
gctcaaggagagtttgctggtctaatggtaatacgtaaatttcatgaaaaaaatggtgaa
acaaatcgtaatgtttgtttaattccaagctctgcacatggcacaaaccctgctagcgct
caaatggttggtatgaaagtagttgttgtgaaatgtgatcaacatggaaacgtagattat
gaagatttaaaaaataaagctgaagaacattcagaaaatttagctgcccttatggtcact
tacccttcaacacatggtgtttttgaggaaaaaataactgacatttgtgaattaattcat
aatcatggtgggcaagtttacatggatggagcaaatttaaatgcattagtaggtattgcc
aaaccaggaaattttggaccagatgtttgtcatataaatttgcataaaacattttgtata
ccccatggtggtggtggaccaggtatgggaccaatagcgtgtaaaaaacatttagaaata
tttttgccaaaacattctgtgataaaagattgtggcccagtgactggaatgggagcagta
tctgcagctccttggggcagctccagtattttatcgatttcatggatgtatataaagatg
atgggttcagaaggtttaagaaaagcatcacaagttgcaatactaaatgcaaattacatt
gcacataaattaaaagactcttttccaattttatataagggtaaaagtggcaatgtagct
catgaatgtatcattgatattagaacgataaaaagtgaaacagggatcacagaggaagat
attgcaaagcgattgattgattttggctaccatgctccaacaatgtcttggcctgttgct
ggtacaatgatgattgaacctacggaaagtgaaagtttgagtgaaattgacaagttttgt
tctactcttataaagataaaacaagaaatagataaaattcagtctggtgaatatgacaag
actgacaacccattgaagaatgcgccacatactcacgttgaattaacatccaataagtgg
gatcataagtatgaaagagaagaggctgcttatccttcggagtttttaagaacaaataaa
tattggcctccagttggtagagtagataatgtttatggagataaaaacttgttttgcaca
tgcccatctatggaagagtacgaagacacagcagcttag
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