Candidatus Pelagibacter giovannonii: E5R92_03880
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Entry
E5R92_03880 CDS
T06537
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E5R92_03880 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
peg01007
]
E5R92_03880 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peg03016
]
E5R92_03880 (hisS)
Enzymes [BR:
peg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
E5R92_03880 (hisS)
Amino acid related enzymes [BR:
peg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
E5R92_03880 (hisS)
Transfer RNA biogenesis [BR:
peg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
E5R92_03880 (hisS)
Prokaryotic type
E5R92_03880 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
DUF3313
Motif
Other DBs
NCBI-ProteinID:
QIZ20922
UniProt:
A0A6H1Q1X6
LinkDB
All DBs
Position
complement(701621..703018)
Genome browser
AA seq
465 aa
AA seq
DB search
MNKDKKILIPGLPSGFQDRWGKTLSLKKKLLKVIEDNYISYGYSDLETSPMELSSNIGNS
LAEDDSNPMADIFTFNEDDKEISLRYDLSNPLARFYAQNYLELPNPYKRYQIGDVFRREK
PGNGRFKSFGQCDADIIGKFNSAQANSELCNLIASTLIKCGLKKDQFVVNISNRKIVQGL
MDQLKITDEKQKQKVLRAIDKLDKPGFGISGVQQLLTEKRTDDSGAVTIGAKLSTDQASE
IINFLKVKDLDQLKSNLKNTLSEEGIGETEDLLKVLSYGEYADVVKFDSSKIRGLDIYTG
FIVETNLTFEVKNPKGKVISPGSVCSGGEYLVSKFKGEDFLGTGISIGIDRLVFCLEQLS
QIQVDENKPVIVCVMDEKYLKNYYEILKVLRDNNINSEIFLDSKKNLGKNLTYANKKQCP
VAVICGENEFKDNTITLKNLLGVKGENNQVTVPKEKLLDEIKKFL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagataaaaaaatattaataccaggcttacctagtggttttcaagacagatgg
ggcaaaacattatctcttaaaaaaaaattactaaaggttattgaagataactatataagc
tatggatacagcgatttagaaacatctccaatggagttaagttctaatattggaaattct
ctagctgaagatgatagtaaccccatggcagacatcttcacatttaacgaagatgataag
gaaatttctttgaggtatgatttatcaaatcctcttgcaaggttttatgctcaaaattat
ttagaattacctaacccatacaagagatatcaaataggagatgtattcagacgagaaaaa
ccaggaaacggtcgttttaaaagttttggtcaatgtgatgctgacattatcggtaagttt
aatagtgctcaggctaattcagaattatgtaatttaattgcaagtacactaataaaatgt
ggattaaaaaaggatcaatttgtagtcaatattagtaatagaaaaattgttcaaggttta
atggatcaattaaaaataactgatgaaaagcaaaaacaaaaagttttaagagcaattgat
aaattggataaacctggttttggaattagtggagttcaacaattattaacagaaaaaaga
accgatgatagtggggccgtaaccattggcgcaaagttgagtactgatcaagcatctgaa
attattaactttttaaaagttaaagatttagatcaattaaagtctaatttaaaaaataca
ctttcagaggaaggtattggagaaactgaagatttattaaaagtattaagctatggcgaa
tatgctgatgtggttaaatttgactcttctaaaattcgtggacttgatatttatacaggt
tttatagttgaaactaatttaacatttgaagtaaaaaatccaaaaggaaaagttatttct
cctggttctgtttgtagcggcggggaatatttagtatctaagtttaagggagaagacttt
ttagggacagggattagtattggaattgacagattagtattttgtcttgaacagctttcc
caaattcaagtagatgaaaacaaacctgtaattgtttgtgtaatggacgaaaaatattta
aaaaattattatgagattttaaaagttttaagagacaataatatcaactctgaaatattt
ttagacagtaaaaaaaatcttggcaaaaatttaacgtatgcgaataaaaaacaatgccca
gtagctgttatttgtggtgaaaatgaatttaaagataatacgattactttaaaaaacctt
ttaggagttaaaggtgaaaacaatcaagttacagttccaaaagaaaaactattagatgaa
attaaaaaattcctttaa
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