Candidatus Pelagibacter giovannonii: E5R92_03970
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Entry
E5R92_03970 CDS
T06537
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00300
Lysine biosynthesis
peg01100
Metabolic pathways
peg01120
Microbial metabolism in diverse environments
peg01230
Biosynthesis of amino acids
Module
peg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E5R92_03970 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
peg01002
]
E5R92_03970 (dapE)
Enzymes [BR:
peg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
E5R92_03970 (dapE)
Peptidases and inhibitors [BR:
peg01002
]
Metallo peptidases
Family M20
E5R92_03970 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QIZ20937
UniProt:
A0A6H1Q1Z3
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All DBs
Position
713236..714393
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AA seq
385 aa
AA seq
DB search
MPTYNEITLAKELIRFPSITPIDAGVMKFLAKRLTAIGFKCKILEFKDKNSKPVKNLYAR
LGNTQPNFMFAGHLDVVPPGNIKDWTIKPFSPAIKKNHLIGRGANDMKSAIASWVVAVNN
FVSNNKKINGSISLLITGDEEGVAINGTKKVVDYLKKKKEKIDFCLVGEPTNPNKLGEMI
KIGRRGSINAELTIIGTQGHVAYPHRAKNPSTSLIKILNEIKEIKFDNGTKDFQPTNLEI
TKININNTADNVIPGLARSTFNIRFNNRHTSSRLKNRLNKIFKKITKKDKSNFKVEYRVS
GEAFLTKPNKTTYMIQDVIKKITKIKPQLSTTGGTSDARFIRKIAPCLEFGLVGKTMHKV
DEAVSISDLKKLTKIYSTILKKYFL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttacaatgaaatcacattagccaaagaactaataagatttccaagcattacg
ccaattgatgctggggtaatgaaattcttagctaaaagattaactgctattggatttaaa
tgtaagattttagagtttaaagataaaaactctaaaccagttaaaaacctatatgcaaga
ttgggtaatactcaaccaaactttatgtttgctggtcatttggatgtggttccaccagga
aatataaaagattggacaattaaaccttttagtccagctattaaaaaaaatcatcttatt
ggtagaggcgctaatgacatgaaaagtgcaattgcaagctgggttgttgctgtaaataac
tttgtatcaaataataagaaaattaatggatcgattagtttattaattactggtgatgaa
gaaggtgttgcaattaatggtacaaaaaaagtagttgattacttaaaaaagaaaaaagaa
aaaatagatttctgtttagttggtgagccaacaaaccccaataaacttggtgaaatgatt
aaaattggtagaagaggaagtatcaatgctgagttaactataattggaactcaaggtcat
gttgcatatcctcatcgtgctaaaaatccatcgacttcattgatcaaaatactaaatgaa
ataaaagaaataaaatttgataacggaacaaaagactttcagccaacaaatttagaaata
actaaaattaatataaataatacagctgataatgttattccaggacttgcaaggtctacc
tttaacataagatttaataatagacatacatcttctagattaaagaatagattaaataaa
attttcaaaaaaattaccaaaaaagataaatctaattttaaagtagaatatcgtgtatca
ggtgaagcttttttaactaagcccaataaaacaacttacatgattcaagatgtaataaaa
aaaattacaaaaattaaacctcaattgtctacaacaggtggaacttcagatgcaagattt
attagaaaaattgctccatgtttagaatttggtttagtaggtaaaacaatgcacaaagta
gatgaagcagtgtctatttcagatttaaaaaaactaacaaaaatctattctacaatactt
aaaaaatattttttataa
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