Candidatus Pelagibacter giovannonii: E5R92_04200
Help
Entry
E5R92_04200 CDS
T06537
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00061
Fatty acid biosynthesis
peg00071
Fatty acid degradation
peg01100
Metabolic pathways
peg01212
Fatty acid metabolism
peg02024
Quorum sensing
peg04146
Peroxisome
Module
peg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E5R92_04200
00071 Fatty acid degradation
E5R92_04200
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E5R92_04200
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5R92_04200
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
peg01004
]
E5R92_04200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peg04147
]
E5R92_04200
Enzymes [BR:
peg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E5R92_04200
Lipid biosynthesis proteins [BR:
peg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E5R92_04200
Exosome [BR:
peg04147
]
Exosomal proteins
Exosomal proteins of breast milk
E5R92_04200
Exosomal proteins of breast cancer cells
E5R92_04200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QIZ20981
UniProt:
A0A6H1Q2G7
LinkDB
All DBs
Position
complement(764527..766233)
Genome browser
AA seq
568 aa
AA seq
DB search
MEINKVNNLLELFYNQYLKQDKTSVFLQSLKEVEKRYSWEDVYSNVIKLSEEISKYIKKG
DRCLLISENRPEWMISDLSIMLSGGITVPAYTTYIERDYEYIIDDCKPTVLIISDKTQYL
KVKNIIPKKKFIKKIIFFDVIEEFDQELHVSINQIFANKSFSSLNFSELKIQRKDVACII
YTSGTQGNPKGVVLSHGGILNNCEGALGLLKEFISKNPKFLTWLPLSHSYEHTVQFVQIV
VGAQVFYAESIEKLIKDMGNCSPEIMTAVPRFYQNLHQKINTNFSKATGIKKFLINQTIK
LGNKKLNREQFSLIESLINFVCDLLVRKKIKEQFGGNLKAFISGGGALDKEVGYFLNAIG
LPTLQGYGLTETSPVVSCNSINEIRVETVGKPFRGNLVKIENDGEILVKGENVMLGYWNN
EEETNKVLKNGWLSTGDIGEFDGEFLKITDRKKDIIITPGGDNISPIKIESDLNKSNFIE
QSLVYGDNKPYLVCLIVLSSEYKNIKNKEIKIEIEKINKNLSKIEKIKKFFVIKNQFTIE
NNMMTPTLKLKRYKIVKTYQNELEKLFN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaacaaagttaataatttattagaactattttataatcaatatctaaaacaa
gataaaacaagtgtgtttttgcagtccttaaaagaagttgaaaaaaggtattcttgggag
gatgtatattcaaatgtcattaaactttctgaggaaatatcaaaatatataaaaaaaggt
gatagatgtttgctaatatcagaaaatagacctgaatggatgatatcagatttatctatt
atgctttcaggaggcataacagttccggcttacacaacttatatagaaagagactacgag
tatataattgatgattgtaagccgactgttttaatcatttctgataagacgcagtattta
aaagtaaaaaatattatacctaaaaaaaaatttataaaaaaaataattttttttgatgta
attgaagagtttgaccaagaacttcatgtaagtattaatcaaatctttgcgaataaaagc
tttagttctttaaatttttctgaattaaaaattcaaagaaaagatgttgcttgtataatt
tatacatccggtacccaaggaaatccaaaaggtgttgtattaagccatggtggaatttta
aacaattgcgaaggagcacttggtttattaaaagagtttatttctaaaaatcctaaattt
ttgacttggctacccctttctcattcatacgagcatacagtccagtttgtccaaatagtt
gtgggagcacaggtattctatgccgagagtatagaaaaacttataaaagatatgggaaat
tgctctccagagataatgacggccgtgcctagattttatcaaaatttacatcaaaaaata
aatactaattttagtaaagctacaggaataaaaaaattcttaatcaatcaaactatcaaa
cttggaaataagaaattaaatagagagcaattttcattaatagaaagtttaatcaatttt
gtttgtgatcttttggtaagaaagaaaatcaaagaacaatttggtggaaatttaaaagca
ttcatatcaggaggaggagcattagacaaagaagtgggttattttttaaatgcaattggt
ctcccaacactacaagggtacggattaacggaaacatctccggtggtaagctgcaattct
attaatgaaattagagtagaaactgtgggcaaaccttttaggggaaatttagttaaaatt
gaaaatgatggtgagattctggttaaaggagaaaatgttatgttaggttactggaataat
gaagaagaaacaaataaagttttaaagaatggatggttatctacaggtgatataggagag
tttgatggtgaatttttaaaaataacagatagaaaaaaagatataattataactccaggt
ggagataatatttctccaatcaaaatagagagtgatttaaataaatctaatttcatagag
caaagtttggtttatggtgataataaaccttacctagtttgtctaattgttttaagttca
gaatataaaaatataaagaataaagaaattaaaatagaaatagaaaaaataaataaaaat
ttaagcaaaatagaaaaaataaaaaagttttttgtaattaaaaatcaatttacaattgaa
aataatatgatgacacctactttgaaattaaaaagatataaaattgtaaaaacttatcaa
aatgagttagaaaaactttttaattaa
DBGET
integrated database retrieval system
