Candidatus Pelagibacter giovannonii: E5R92_04395
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Entry
E5R92_04395 CDS
T06537
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
peg
Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peg03016
]
E5R92_04395 (miaB)
Enzymes [BR:
peg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
E5R92_04395 (miaB)
Transfer RNA biogenesis [BR:
peg03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
E5R92_04395 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Lipase_GDSL
Motif
Other DBs
NCBI-ProteinID:
QIZ21019
UniProt:
A0A6H1Q4J0
LinkDB
All DBs
Position
complement(799571..800938)
Genome browser
AA seq
455 aa
AA seq
DB search
MVLKKNPNIMSKKIFIKTFGCQMNEYDSNRIFDAVKKIGFEKTDKYEDANCYLLNTCHIR
DKAKEKVYHEIGRVKKIFREKKKPIVIVAGCVAQAENQEMLKREPYIDIVIGPQSYHKIN
DAILNFLKNKKKEEETEFDTISKFNYLSQIKNKDSKVSSFLTIQEGCDKFCHFCVVPYTR
GPEYSRPFNQIINEAKELIQSGAKEIILLGQNVNAYSYDEEDKEYRISDLLITLDSFDKL
ERIRYTTSHPKDMTDDLINVYKNSSKLMPLVHLPVQSGSNKILNLMNRKHSIEEYVLIYE
KLKKINSKIEFSSDFIIGYPEEDEQDFKMTMELIEKIKFINSYSFIFSPRPGTVAADLKL
VDQKKSKQRLEVIQKKLFDNQIQTNKSLENKILNVLVENKMKDGIKLFGRTEYMTSVIFD
GNIENIGKIVQVEITSSNQNSLFGKLTESSKKKVA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggtgttaaaaaaaaatcctaacataatgtcgaaaaaaatttttattaaaacttttggc
tgtcaaatgaatgaatatgactcaaatcgtatatttgatgcagtaaaaaaaatcggtttt
gaaaaaactgataaatatgaggatgcgaattgttatcttttaaacacctgccatattaga
gataaagcaaaagaaaaagtttaccatgaaataggaagggttaaaaaaatttttagagag
aaaaaaaaaccaattgtaattgttgctggttgtgttgcccaagctgaaaatcaagaaatg
ttaaaaagagagccttatattgatattgtaataggtccacagtcttatcataaaataaat
gatgcaatattaaattttttaaaaaataaaaaaaaagaggaagaaacagaatttgataca
atttctaaatttaattatctaagtcaaattaaaaataaagacagtaaagtttcttctttt
ttaacaattcaagagggttgtgataaattctgtcatttttgcgtagtgccttatactcgt
ggaccagaatattccagaccttttaatcaaatcataaatgaagcaaaagaattaattcaa
agtggtgcaaaagaaattattttattagggcaaaatgtaaacgcatacagttatgacgaa
gaagacaaagagtacagaatatcagacttgttaattacacttgatagttttgataaactt
gaaagaatccgatacacaacatctcacccaaaggacatgacagatgacttgattaatgtt
tataagaattcatctaaactgatgcccctagtacatttaccagtgcaaagtggatcaaat
aaaattttaaatctaatgaatagaaagcatagcattgaagaatatgtgcttatttatgaa
aaacttaaaaaaattaactcaaaaattgagttttcaagtgattttattattggataccca
gaagaagatgaacaagattttaaaatgacaatggaattaatagaaaaaataaaatttatt
aactcatattcgtttatttttagcccaagaccgggaactgttgctgcggatttaaaacta
gttgatcaaaaaaaatccaaacaaagattagaggtaattcagaagaaattatttgataac
caaatacaaacaaataaatctcttgaaaataaaattttaaatgttctagtagaaaataaa
atgaaagatggaattaagttatttggcagaacagaatatatgacatcagtaatttttgat
ggcaatatagagaacataggaaaaattgtgcaagtcgaaataacaagcagcaatcaaaat
agtctttttggaaaattaactgaaagttctaaaaaaaaagtagcttaa
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