Candidatus Pelagibacter giovannonii: E5R92_04445
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Entry
E5R92_04445 CDS
T06537
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
peg
Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peg03009
]
E5R92_04445 (rsmI)
Enzymes [BR:
peg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
E5R92_04445 (rsmI)
Ribosome biogenesis [BR:
peg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
E5R92_04445 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Ned1_M
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
QIZ21028
UniProt:
A0A6H1Q2H3
LinkDB
All DBs
Position
complement(809883..810746)
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AA seq
287 aa
AA seq
DB search
MILHTENMNNKVKSGLYVVSTPIGNLSDITLRALEVLKKSDYILCEDTRISKNLLERYEI
KSKLIANHKFNEKKNLSKVIDILKSGSIVALISDAGTPSVSDPGAILVNECVSNDIDIFP
IPGASAVSSAVSISGFNEKYFFYGFFPEKNSKLKEDLKRLTNIEGCIVFFISPRKFNRSI
KDLKHYFSNRKIMVCREMTKFFEEYIRTDVDILEPFKSDPKGELTIVISEKVKEKNSSII
LKESDKKNIQKLIKKLSIKDITDLISQNTNVSKKEIYNYCLKLKNEK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgattctacatactgaaaacatgaataataaagttaaaagtggcctttatgttgtatct
actcctattgggaacttaagtgacatcactttaagagccctagaagtattaaaaaaatca
gattatattttatgtgaagatacgcgtatttcaaaaaatttactagagcgatacgagatt
aaatcaaaacttattgcaaaccataaatttaatgaaaaaaaaaatttatcaaaagttatt
gatattttaaaatcaggttcgattgttgcattaatttctgatgctggaactccatctgtc
tcagacccaggagctatattggttaatgaatgtgtcagtaatgacatagatatctttcca
atcccaggtgcgtcagcagtttcctccgcagtttctataagtggatttaatgaaaaatat
tttttttatggtttttttcctgaaaaaaatagtaaattaaaagaagacctcaaaaggctt
acaaatatagagggttgtattgttttttttatctctccacgaaaatttaataggtcaata
aaagatctaaaacattatttttcaaatagaaaaattatggtttgcagagaaatgactaaa
ttttttgaggaatatataagaactgatgtagatatacttgagccatttaaatccgatcct
aaaggagagctaacgattgttatttctgaaaaagtaaaagaaaaaaattcatcgataata
ttgaaagaatctgataaaaaaaatattcaaaaattaattaaaaaactaagcataaaagat
attacagatttaattagtcaaaatacgaatgtatcaaaaaaagagatttataactattgt
ttaaaattaaaaaatgaaaaataa
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