Candidatus Pelagibacter giovannonii: E5R92_04555
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Entry
E5R92_04555 CDS
T06537
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
peg
Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peg03016
]
E5R92_04555 (mnmE)
Transfer RNA biogenesis [BR:
peg03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
E5R92_04555 (mnmE)
Prokaryotic type
Methyltransferases
E5R92_04555 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
AAA_28
MMR_HSR1_Xtn
ABC_tran
AAA_24
GTP_EFTU
THOC7
Roc
AAA_18
SpoIIID
ATP-synt_ab
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QIZ21050
UniProt:
A0A6H1Q3G8
LinkDB
All DBs
Position
complement(831170..832501)
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AA seq
443 aa
AA seq
DB search
MTIYALSTGPGISGIAIVRVSGENTKKVIKLLTNTALPVPRVATLRKIYKINTSELIDEG
IILWFPGPESYTGEDMAEFHIHGSKAVIDALHRSISKIEDCRLANPGEFTKLAFQNGKIN
LLKAESIADLISAETEIQRQQAIKIMNGKSADKFNSLREKLLKILSHVEAKIDFPDEELP
KDILKNIKKISSEVILNIKKILDDQKVGERIREGFKIAIIGPTNAGKSSLLNQLSNRDAA
IVSEIAGTTRDVIETHLNIDGYPVVVSDTAGIRDSKNEIEKKGIKLALDKAENADLKLIV
IDVKSIDFKGVLKELMDENAILVVNKSDLLKEDLSPEIKNFEHVLISVKNNHNVEDLIFK
IKNKLKNKFITSEDILITRERHRQHLEQSLDYLKNFEEKNEAEDFDKAAEDLRLATRHLG
MIVGKIDVEEILGSIFNDFCIGK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttatgctctttccactggcccaggaatttctggtatagctattgttagagtc
tctggagaaaacaccaaaaaagtaataaagttattaaccaatacagcacttccagtgcca
agagttgctacattaagaaaaatctataaaatcaacacttctgagctaattgatgagggc
ataatattgtggtttcctggtcctgagagctatacaggagaagatatggcggaattccac
attcatggcagcaaagcagtaatagatgccctacaccgctcaatttcaaaaattgaagat
tgtcgtttagcgaatccaggagagttcacaaaacttgcttttcaaaatggaaaaataaac
ttactgaaagcagaaagtattgcagatttaatttctgcagaaactgaaattcaaagacag
caggcaataaaaattatgaatggaaaatctgcagataaatttaatagcttaagagaaaaa
cttttaaaaattttatcacacgttgaagcaaaaatagactttccagatgaagaactgcca
aaagatattttaaaaaatattaaaaaaatttccagtgaggtaattttaaatataaaaaaa
attctagatgatcaaaaagttggtgaaagaattagagaaggttttaagattgcaatcata
gggccgaccaatgctggaaaatctagtttactaaaccaactttcaaatcgagatgcagca
atcgtttcagaaatagctggaacaacaagagatgtaatcgaaacgcatttaaatatcgat
ggctatccagttgtggtttctgatactgcaggaatcagagattcgaaaaatgaaatagaa
aaaaaaggaataaaattagcacttgataaagccgaaaatgcagacttaaagttgatcgtt
atagacgttaaaagcattgattttaaaggtgttttaaaagaattgatggatgaaaatgcg
atactggtagttaataaatctgatcttttaaaagaagatttaagtcctgaaataaaaaat
tttgaacatgttttaatttcagtaaaaaacaatcacaatgtagaagatttaatttttaaa
attaaaaataaattaaaaaacaaatttatcacaagtgaagatattttaattactcgtgaa
aggcacaggcaacatcttgagcaaagtttagattatttaaaaaactttgaagaaaaaaat
gaagcagaagattttgataaagctgcagaagatctccgtttagcaacacgacatttagga
atgatagttggaaaaatagatgttgaggagatattaggtagtattttcaacgatttttgt
atcggcaaataa
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