Candidatus Pelagibacter giovannonii: E5R92_04605
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Entry
E5R92_04605 CDS
T06537
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg03030
DNA replication
peg03430
Mismatch repair
peg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E5R92_04605 (dnaQ)
03430 Mismatch repair
E5R92_04605 (dnaQ)
03440 Homologous recombination
E5R92_04605 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peg03032
]
E5R92_04605 (dnaQ)
03400 DNA repair and recombination proteins [BR:
peg03400
]
E5R92_04605 (dnaQ)
Enzymes [BR:
peg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E5R92_04605 (dnaQ)
DNA replication proteins [BR:
peg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E5R92_04605 (dnaQ)
DNA repair and recombination proteins [BR:
peg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E5R92_04605 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
TerS_N
Motif
Other DBs
NCBI-ProteinID:
QIZ21060
UniProt:
A0A6H1Q3I5
LinkDB
All DBs
Position
841467..842138
Genome browser
AA seq
223 aa
AA seq
DB search
MKEVILDTETTGLSVKDGHRIVEIGCIELENLIPTKNRFHCYLNPEKKVSEKALEVHGYT
DEFLSTHKKFREIVDEFLHFIEDKRLVIHNAEFDLSHLNNELALLGKKKLNSENVVDTLA
LARDKFPGSSISLDALCKRYRVDNSKRTQHTALIDCDLLAKVYINLLDQKEPTLNFKNED
NEKIIISSNDTNQYYKKIVKPSEIELKLHKEYLKNNLKKNFFN
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagtaatactagatacagaaacaacaggactatcggttaaagatggacataga
attgtagaaatcggatgtatcgagttagaaaatttgataccaaccaaaaatagatttcac
tgttatcttaatccagagaaaaaggtttctgaaaaagctttagaagttcatggttatacg
gatgaatttttatctactcacaaaaagtttagagaaatagtggacgagtttttgcatttt
atagaagacaagagacttgtaatacacaacgctgaatttgacttatctcacttaaacaat
gaattagcattgttgggtaagaagaaattaaacagtgagaacgttgtagacacacttgct
ttagctagggataaatttccaggctcttcaataagtcttgacgcattgtgcaaaagatac
agagtagataattcaaaaagaacacaacatacagctcttatcgactgtgatctcttagct
aaagtttatattaatcttcttgatcaaaaagaaccaactttaaatttcaaaaatgaagat
aatgaaaaaataataataagctcaaatgatacaaaccagtattataaaaaaatagttaag
ccatcagagatagaacttaaactccataaagaatatttaaaaaataatttaaagaagaat
ttttttaattag
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