Candidatus Pelagibacter giovannonii: E5R92_04835
Help
Entry
E5R92_04835 CDS
T06537
Name
(GenBank) DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
peg
Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peg03400
]
E5R92_04835
Enzymes [BR:
peg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E5R92_04835
DNA repair and recombination proteins [BR:
peg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E5R92_04835
Prokaryotic type
E5R92_04835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
5_nucleotid_C
Motif
Other DBs
NCBI-ProteinID:
QIZ21103
UniProt:
A0A6H1Q419
LinkDB
All DBs
Position
complement(877217..878359)
Genome browser
AA seq
380 aa
AA seq
DB search
MIFGASRAKAVDQLNNFIEQNLTDYSKLRNFDFGPDNRSNISCLSPYITHGIINELEVID
KSLKKFSFVKNEKFIQEVMWRVYWKGWLELRPNVWSDYLVELGKVKDEFKNNQSYLDAIE
GKTNIDCFNQWVIELKENNYLHNHTRMWFASIWIFTLELPWQLGAEFFMQHLYDGDAASN
TLGWRWVAGIQTKGKHYLASEWNINKFTNNRFKNIKLNENANPISSDKIYSVTNKSFENS
EIYEDKTLLIFENNMTFEFSDFKEHKFKKILLVSNDTNRTIKLSEKVLKFKANLLEDQKI
RIEEKSINCETVNINNLKNITEDVYAIYPTVGENLDFIQNNQLKNIKFLYRKLDQFSWQY
CNKGFFNFKNYIPKIIANFN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatatttggagcttcaagggctaaagccgttgatcaattaaataattttatagaacaa
aatcttacagattattcaaaactaagaaattttgattttggacctgataatagatctaat
atttcttgtttatctccctatataactcacggaataattaatgaattagaggtaattgat
aaatcccttaaaaagttttcatttgtaaaaaatgaaaaatttattcaggaggtaatgtgg
cgagtttattggaaaggttggctagaattaagacctaatgtttggtcagattacttagta
gaattaggtaaagttaaagatgaatttaaaaacaatcaaagttatttggatgcaattgaa
ggaaagacaaatatagattgttttaatcaatgggtaattgaacttaaagaaaataactat
cttcataaccacacaagaatgtggtttgctagtatttggatattcactctagaattacca
tggcaattgggagctgaattttttatgcaacatctttacgatggtgatgctgcatcaaac
actcttggttggagatgggtagctggaattcaaactaaaggcaaacattacctcgcgagt
gaatggaatattaataaatttacaaacaatagatttaaaaacataaaacttaatgaaaat
gcaaatcctatatccagtgataaaatatattctgttaccaataagagctttgaaaattct
gagatttatgaagataaaactttattaatatttgaaaataatatgacatttgaattttct
gattttaaagaacataaatttaaaaaaattttgctagtctcaaatgatacaaatagaact
atcaaattaagtgaaaaagtgttgaaatttaaagctaatcttttagaagatcaaaaaata
agaatagaagaaaaatcaattaattgtgaaactgttaacattaataatttaaaaaatatt
actgaggatgtttatgcaatttatccaactgttggcgaaaacttagattttattcaaaat
aatcaattaaaaaatattaaatttttatatagaaagttagatcagttttcttggcaatat
tgcaataaggggttttttaattttaaaaattatattccaaaaattattgctaattttaat
taa
DBGET
integrated database retrieval system
