KEGG   Candidatus Pelagibacter giovannonii: E5R92_05035
Entry
E5R92_05035       CDS       T06537                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
peg  Candidatus Pelagibacter giovannonii
Pathway
peg00300  Lysine biosynthesis
peg00470  D-Amino acid metabolism
peg01100  Metabolic pathways
peg01110  Biosynthesis of secondary metabolites
peg01120  Microbial metabolism in diverse environments
peg01230  Biosynthesis of amino acids
Module
peg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:peg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    E5R92_05035
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    E5R92_05035
Enzymes [BR:peg01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     E5R92_05035
SSDB
Motif
Pfam: DAP_epimerase AAA_7
Other DBs
NCBI-ProteinID: QIZ21143
UniProt: A0A6H1Q459
LinkDB
Position
complement(912576..913400)
AA seq 274 aa
MDIKAFKMDGLGNDFVIIDQRSQDFNLNENQIIKVCDRSFIGCDQLILIKKNKEIDADIE
FYNSDGSVSGACGNGTRCVADLLSKESGKKEITLLTASGSLKSKILGNNLVETEIGVPKV
NWQEIPLSKQLDTQDLKIEIVDRKNTKHIGGTAINVGNPHIIFFVDDIEAFDLQSIGPKI
ENHPLFPEKCNVTLAKVVNRNLIKVKVWERGSGLTKACGTAACATAAAANINNLVEKTTD
IAFALGNLTISIDERNSIHMKGPVSDIKNIDIKL
NT seq 825 nt   +upstreamnt  +downstreamnt
atggatattaaagcatttaaaatggatggtttaggcaatgattttgtaattattgatcaa
agaagccaagatttcaatttaaacgaaaatcaaataattaaggtatgtgatcgtagtttt
attggatgtgatcaactcatcctaattaagaaaaataaagaaatagatgcagatatagaa
ttctataattcagatggaagtgtatctggagcttgtggaaatggtactaggtgtgtggca
gatcttctatcaaaagaaagtggtaaaaaagaaataacactcttaacagcttcaggttct
ctaaaatcaaaaattttaggaaataatttagttgagaccgaaataggtgtaccaaaagtt
aattggcaagagattcctttaagtaagcaactagatacacaagacttaaaaattgaaatt
gtagacagaaaaaataccaagcatattggtggaacagccataaatgtaggcaatccacac
ataattttttttgtagacgatatagaggcatttgacttacaaagtattggtccaaaaatt
gaaaatcacccactatttccagaaaaatgtaatgtgaccctggccaaagttgtgaataga
aatttaataaaagtaaaagtttgggaaagaggatctggacttactaaggcttgtggtacg
gcagcttgtgcaacggctgcagcagctaatattaataatctagtagaaaaaactacagat
atagcgtttgcattaggtaatttaacaatttctattgatgaaagaaatagtattcacatg
aaaggacctgtgtctgatatcaaaaatattgacattaaattataa

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