Candidatus Pelagibacter giovannonii: E5R92_05035
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Entry
E5R92_05035 CDS
T06537
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00300
Lysine biosynthesis
peg00470
D-Amino acid metabolism
peg01100
Metabolic pathways
peg01110
Biosynthesis of secondary metabolites
peg01120
Microbial metabolism in diverse environments
peg01230
Biosynthesis of amino acids
Module
peg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E5R92_05035
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E5R92_05035
Enzymes [BR:
peg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
E5R92_05035
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QIZ21143
UniProt:
A0A6H1Q459
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All DBs
Position
complement(912576..913400)
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AA seq
274 aa
AA seq
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MDIKAFKMDGLGNDFVIIDQRSQDFNLNENQIIKVCDRSFIGCDQLILIKKNKEIDADIE
FYNSDGSVSGACGNGTRCVADLLSKESGKKEITLLTASGSLKSKILGNNLVETEIGVPKV
NWQEIPLSKQLDTQDLKIEIVDRKNTKHIGGTAINVGNPHIIFFVDDIEAFDLQSIGPKI
ENHPLFPEKCNVTLAKVVNRNLIKVKVWERGSGLTKACGTAACATAAAANINNLVEKTTD
IAFALGNLTISIDERNSIHMKGPVSDIKNIDIKL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggatattaaagcatttaaaatggatggtttaggcaatgattttgtaattattgatcaa
agaagccaagatttcaatttaaacgaaaatcaaataattaaggtatgtgatcgtagtttt
attggatgtgatcaactcatcctaattaagaaaaataaagaaatagatgcagatatagaa
ttctataattcagatggaagtgtatctggagcttgtggaaatggtactaggtgtgtggca
gatcttctatcaaaagaaagtggtaaaaaagaaataacactcttaacagcttcaggttct
ctaaaatcaaaaattttaggaaataatttagttgagaccgaaataggtgtaccaaaagtt
aattggcaagagattcctttaagtaagcaactagatacacaagacttaaaaattgaaatt
gtagacagaaaaaataccaagcatattggtggaacagccataaatgtaggcaatccacac
ataattttttttgtagacgatatagaggcatttgacttacaaagtattggtccaaaaatt
gaaaatcacccactatttccagaaaaatgtaatgtgaccctggccaaagttgtgaataga
aatttaataaaagtaaaagtttgggaaagaggatctggacttactaaggcttgtggtacg
gcagcttgtgcaacggctgcagcagctaatattaataatctagtagaaaaaactacagat
atagcgtttgcattaggtaatttaacaatttctattgatgaaagaaatagtattcacatg
aaaggacctgtgtctgatatcaaaaatattgacattaaattataa
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