Candidatus Pelagibacter giovannonii: E5R92_05135
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Entry
E5R92_05135 CDS
T06537
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00020
Citrate cycle (TCA cycle)
peg00640
Propanoate metabolism
peg00660
C5-Branched dibasic acid metabolism
peg00720
Other carbon fixation pathways
peg01100
Metabolic pathways
peg01110
Biosynthesis of secondary metabolites
peg01120
Microbial metabolism in diverse environments
peg01200
Carbon metabolism
Module
peg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
peg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E5R92_05135 (sucD)
00640 Propanoate metabolism
E5R92_05135 (sucD)
00660 C5-Branched dibasic acid metabolism
E5R92_05135 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
E5R92_05135 (sucD)
Enzymes [BR:
peg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
E5R92_05135 (sucD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QIZ21163
UniProt:
A0A6H1Q478
LinkDB
All DBs
Position
933033..933908
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AA seq
291 aa
AA seq
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MSVLINKNTKVICQGFTGAHGTFHSEQALKYGTNLVGGVTPKKGGQKHLERPVFNTVAEA
KKEVGTDATMIYVPAKFAAAAIIEAIDASIELIVCITEGIPIQDMLRVKQKLNNSKSRLI
GPNCPGIITPDECKIGIMPGNIHKKGSVGIVSRSGTLTYEAVAQTTENGLGQSTCIGIGG
DPINGTNFIDCLDLFLKDDETESILMIGEIGGSAEEEAAEFVKNHKIKKPMVGFVAGITA
PPGRTMGHAGAIISGGKGGAEDKIKKMEECGITIAKSPSELGKTLFNKLSN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttttaattaataaaaatacaaaagttatatgtcaaggtttcacaggtgcacat
ggaacttttcattctgaacaagcattaaagtatggaacaaatcttgtaggtggagtaaca
cccaaaaaaggaggacaaaaacatcttgaacgtccagtatttaatactgtagctgaagct
aaaaaagaagttggtactgatgcaactatgatttatgtgccagcaaaatttgcagcagca
gctataatagaagctattgatgcatctattgagcttatagtttgtattactgaaggtata
ccaattcaagatatgcttcgtgttaaacaaaagctaaataattcaaaaagcagattgata
ggacctaattgtccaggaataattactcctgatgaatgtaaaattggaattatgcctgga
aatattcacaagaaaggttctgtgggaattgtttcaagatctggaactttaacctatgag
gcagttgcacaaacaactgaaaatggattagggcaatctacttgtataggtattggtgga
gatccaataaatggaacaaactttattgattgtttagatttatttttaaaagatgatgag
acggaatctattcttatgataggagaaattggcggttctgcagaagaagaagcagctgaa
tttgttaaaaatcataaaataaaaaagcctatggttgggtttgttgctggaataacagca
cccccaggaagaactatggggcacgcaggagctattatctcaggtggcaagggtggagca
gaggataagattaaaaaaatggaggaatgtgggatcacaattgcaaaatcaccatctgaa
ctaggcaaaacattatttaataaattatctaattga
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