Candidatus Pelagibacter giovannonii: E5R92_05150
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Entry
E5R92_05150 CDS
T06537
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00010
Glycolysis / Gluconeogenesis
peg00020
Citrate cycle (TCA cycle)
peg00260
Glycine, serine and threonine metabolism
peg00280
Valine, leucine and isoleucine degradation
peg00310
Lysine degradation
peg00380
Tryptophan metabolism
peg00620
Pyruvate metabolism
peg00630
Glyoxylate and dicarboxylate metabolism
peg00640
Propanoate metabolism
peg00670
One carbon pool by folate
peg00785
Lipoic acid metabolism
peg01100
Metabolic pathways
peg01110
Biosynthesis of secondary metabolites
peg01120
Microbial metabolism in diverse environments
peg01200
Carbon metabolism
peg01210
2-Oxocarboxylic acid metabolism
peg01240
Biosynthesis of cofactors
Module
peg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
peg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
peg_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
peg_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
E5R92_05150 (lpdA)
00020 Citrate cycle (TCA cycle)
E5R92_05150 (lpdA)
00620 Pyruvate metabolism
E5R92_05150 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
E5R92_05150 (lpdA)
00640 Propanoate metabolism
E5R92_05150 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E5R92_05150 (lpdA)
00280 Valine, leucine and isoleucine degradation
E5R92_05150 (lpdA)
00310 Lysine degradation
E5R92_05150 (lpdA)
00380 Tryptophan metabolism
E5R92_05150 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
E5R92_05150 (lpdA)
00670 One carbon pool by folate
E5R92_05150 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peg04147
]
E5R92_05150 (lpdA)
Enzymes [BR:
peg01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
E5R92_05150 (lpdA)
Exosome [BR:
peg04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
E5R92_05150 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
FAD_binding_3
NAD_binding_8
GIDA
HI0933_like
DAO
Thi4
Lys_Orn_oxgnase
AlaDh_PNT_C
Amino_oxidase
UDPG_MGDP_dh_N
3HCDH_N
DUF7768
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QIZ21166
UniProt:
A0A6H1Q384
LinkDB
All DBs
Position
938130..939530
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AA seq
466 aa
AA seq
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MSDKFQAVVIGGGPGGYVCAIRLAQLGLKTACIESRGSLGGTCLNVGCIPSKNLLNISEN
YHKAQNFSKLGIEVGEVKLNLQKMMQNKDKAVTILTKGVEFLFKKNKVTYFKGTGSFKSA
NKISILDDQKKETIIETDKIVISTGSVPVALPGIEFDEKIIVSSTGALTLQSVPRKMVVV
GGGYIGLEMGSVWSRLGAEVHVVEFLEHITPGMDREISTEFMKILKKQGINFHMQTKVEG
IKKNANGAIVTTSDKDGKKVDFDCDVVLISVGRKPNTTNLNLEAVGVELDEKKRIKTNKT
FQTNIKNVYAIGDVIEGPMLAHKAEDEGIAVAENIAGQSGHVNYDIIPGVVYTTPEVASI
GKTEEQLKEANTKYKIGKFSFMANSRAKAIDEAEGFVKILADEKTDRVLGAHIIGPHAGE
LIGEIGVAMEFGASAEDIARTCHAHPTFSEAVKEAALSVDKRAIHS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaatttcaagcagttgtaataggtggtggtccaggaggttatgtgtgtgca
ataagattagcacaattgggacttaaaactgcatgtatagaatcaagaggctcattaggt
ggaacttgtttaaatgttgggtgtataccttctaaaaatttattaaatatttctgaaaat
tatcataaggcacagaatttctctaaacttggcattgaggtgggtgaggtaaaacttaat
cttcaaaaaatgatgcaaaataaggataaagcagtaacaattttgactaagggtgtagag
tttttatttaaaaaaaataaagtcacttattttaaaggcactggaagctttaaatcagca
aataaaatctcaatattagatgatcaaaaaaaagaaaccataattgaaacagataaaata
gtaattagtacagggtcagttccagtcgcattaccaggtattgaatttgatgaaaaaata
attgtatcttcaacaggtgcattaactctgcaatcggttccaagaaaaatggttgtagtt
ggtggtggttatataggattagagatggggtctgtttggtctagattaggtgcagaagta
catgtagttgaatttttagagcatattactcctggtatggatagagaaatatctacagag
tttatgaaaatattaaagaaacaaggaattaattttcatatgcagacaaaagtagaagga
attaaaaaaaatgctaatggtgctatagtgacaacatcagataaagatggaaaaaaagta
gattttgattgtgatgtggttcttatatctgttggtagaaaacctaacacaaccaactta
aacttagaagcagttggtgttgaactagatgaaaagaaaagaattaaaactaacaaaaca
tttcaaacaaatattaagaatgtgtatgctattggagatgtaattgaaggaccaatgtta
gcgcacaaagctgaagatgaaggtattgctgttgcagaaaatattgcaggacaatcagga
catgttaattatgatattattcctggagttgtttatacaacaccagaagttgcttcaatt
gggaaaacagaagaacaattaaaagaagcaaatactaaatataaaattggtaaattttca
tttatggcaaattcaagagccaaagcaattgatgaagcagaaggctttgttaaaattcta
gctgatgaaaaaacagatagagttctaggagcacatattattggacctcatgcaggtgaa
ttaattggggaaattggagttgcaatggagtttggtgctagcgctgaagatattgcaaga
acatgtcatgcgcacccaacattttctgaagcagtaaaagaagcagcgttatcagtagat
aaaagagcaatacactcttag
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