KEGG   Candidatus Pelagibacter giovannonii: E5R92_05150
Entry
E5R92_05150       CDS       T06537                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
peg  Candidatus Pelagibacter giovannonii
Pathway
peg00010  Glycolysis / Gluconeogenesis
peg00020  Citrate cycle (TCA cycle)
peg00260  Glycine, serine and threonine metabolism
peg00280  Valine, leucine and isoleucine degradation
peg00310  Lysine degradation
peg00380  Tryptophan metabolism
peg00620  Pyruvate metabolism
peg00630  Glyoxylate and dicarboxylate metabolism
peg00640  Propanoate metabolism
peg00670  One carbon pool by folate
peg00785  Lipoic acid metabolism
peg01100  Metabolic pathways
peg01110  Biosynthesis of secondary metabolites
peg01120  Microbial metabolism in diverse environments
peg01200  Carbon metabolism
peg01210  2-Oxocarboxylic acid metabolism
peg01240  Biosynthesis of cofactors
Module
peg_M00009  Citrate cycle (TCA cycle, Krebs cycle)
peg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
peg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
peg_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:peg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E5R92_05150 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E5R92_05150 (lpdA)
   00620 Pyruvate metabolism
    E5R92_05150 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E5R92_05150 (lpdA)
   00640 Propanoate metabolism
    E5R92_05150 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E5R92_05150 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E5R92_05150 (lpdA)
   00310 Lysine degradation
    E5R92_05150 (lpdA)
   00380 Tryptophan metabolism
    E5R92_05150 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E5R92_05150 (lpdA)
   00670 One carbon pool by folate
    E5R92_05150 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:peg04147]
    E5R92_05150 (lpdA)
Enzymes [BR:peg01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E5R92_05150 (lpdA)
Exosome [BR:peg04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E5R92_05150 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 FAD_binding_3 NAD_binding_8 GIDA HI0933_like DAO Thi4 Lys_Orn_oxgnase AlaDh_PNT_C Amino_oxidase UDPG_MGDP_dh_N 3HCDH_N DUF7768 NAD_binding_7
Other DBs
NCBI-ProteinID: QIZ21166
UniProt: A0A6H1Q384
LinkDB
Position
938130..939530
AA seq 466 aa
MSDKFQAVVIGGGPGGYVCAIRLAQLGLKTACIESRGSLGGTCLNVGCIPSKNLLNISEN
YHKAQNFSKLGIEVGEVKLNLQKMMQNKDKAVTILTKGVEFLFKKNKVTYFKGTGSFKSA
NKISILDDQKKETIIETDKIVISTGSVPVALPGIEFDEKIIVSSTGALTLQSVPRKMVVV
GGGYIGLEMGSVWSRLGAEVHVVEFLEHITPGMDREISTEFMKILKKQGINFHMQTKVEG
IKKNANGAIVTTSDKDGKKVDFDCDVVLISVGRKPNTTNLNLEAVGVELDEKKRIKTNKT
FQTNIKNVYAIGDVIEGPMLAHKAEDEGIAVAENIAGQSGHVNYDIIPGVVYTTPEVASI
GKTEEQLKEANTKYKIGKFSFMANSRAKAIDEAEGFVKILADEKTDRVLGAHIIGPHAGE
LIGEIGVAMEFGASAEDIARTCHAHPTFSEAVKEAALSVDKRAIHS
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtcagataaatttcaagcagttgtaataggtggtggtccaggaggttatgtgtgtgca
ataagattagcacaattgggacttaaaactgcatgtatagaatcaagaggctcattaggt
ggaacttgtttaaatgttgggtgtataccttctaaaaatttattaaatatttctgaaaat
tatcataaggcacagaatttctctaaacttggcattgaggtgggtgaggtaaaacttaat
cttcaaaaaatgatgcaaaataaggataaagcagtaacaattttgactaagggtgtagag
tttttatttaaaaaaaataaagtcacttattttaaaggcactggaagctttaaatcagca
aataaaatctcaatattagatgatcaaaaaaaagaaaccataattgaaacagataaaata
gtaattagtacagggtcagttccagtcgcattaccaggtattgaatttgatgaaaaaata
attgtatcttcaacaggtgcattaactctgcaatcggttccaagaaaaatggttgtagtt
ggtggtggttatataggattagagatggggtctgtttggtctagattaggtgcagaagta
catgtagttgaatttttagagcatattactcctggtatggatagagaaatatctacagag
tttatgaaaatattaaagaaacaaggaattaattttcatatgcagacaaaagtagaagga
attaaaaaaaatgctaatggtgctatagtgacaacatcagataaagatggaaaaaaagta
gattttgattgtgatgtggttcttatatctgttggtagaaaacctaacacaaccaactta
aacttagaagcagttggtgttgaactagatgaaaagaaaagaattaaaactaacaaaaca
tttcaaacaaatattaagaatgtgtatgctattggagatgtaattgaaggaccaatgtta
gcgcacaaagctgaagatgaaggtattgctgttgcagaaaatattgcaggacaatcagga
catgttaattatgatattattcctggagttgtttatacaacaccagaagttgcttcaatt
gggaaaacagaagaacaattaaaagaagcaaatactaaatataaaattggtaaattttca
tttatggcaaattcaagagccaaagcaattgatgaagcagaaggctttgttaaaattcta
gctgatgaaaaaacagatagagttctaggagcacatattattggacctcatgcaggtgaa
ttaattggggaaattggagttgcaatggagtttggtgctagcgctgaagatattgcaaga
acatgtcatgcgcacccaacattttctgaagcagtaaaagaagcagcgttatcagtagat
aaaagagcaatacactcttag

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